Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1759 ATGGCTGCCTTAAATTTAAACCTCCTTATAGTTACACTCATCTATATTCATCATGTTTCCTTAGCTTTTGCAAAAGTTACTCTGAACTCGCCACTTTTCACGGATACCGATGATGCGTGGCTTTCACCCTCGGGAGAATTTGCTTTCGGGTTTCGACAACTGAATGATAATGACACCAAGCTGTTCATGGTTGCCATCTGGTATAACATGATACCGGACGACCAGACCGTTGTTTGGAGTGCAAGAAAAGACAACAAGCTTGCAACAGCGCCAGCGGGATCAAAGTTGCAGATCACACAAGAAGGTCTGTCGTTGACAAATCCCAAAGGGGATTTCATATGGACGGCAAGTTCAAAAGATTTTGTTTCGGAAGGAGCTATGCTTGACAGTGGCAACTTTGTTCTCCTAAACGGTAGCTCTGCAAATGTGTGGCAAAGTTTTGAACATCCCACAGACACCTTGTTGCCTAATCAATCTCTCCAGCTCGGAGGCATGCTGACTTCTCGATTGACAGACACAAATTACACTACAGGAAGGTTTCAACTTTATTTTGATGGTGGTAATCTCTTGCTCAGCCCCCTTGCTTGGCCCTCTCAACTGCGTTACAAGTCCTATCCTGTAATTGATGCCTCTGGCAACGCTTCACGATTGCTGTTCAACATATCGGGGGATATCTATGTGGAGACCACCAATGGGAATAGAATCCAACCTCAAGGTCAAAAATGGGTTAGCAATAGCAGCAGTAGCTTGGATCTCAATCCTGAGATGAATTTCTACAGAGCAACGCTTGACCCCAGTGGAGTTTTCACGCAGTATGCTCATCCAAGGAACAACACTGCTCGGCAAGGATGGATAATCATGAGGTATGTTCCTGATGACATTTGCAATATAATATTTGATCGGTTTGGTAGTGGTTCCTGTGGCTATAATAGCTACTGCGACATGGAAAATGAGAGACCTACTTGTAATTGCCTTGATGGGTATTCACTGGTGGATCCAAGTAATCAATTTGGTGGATGCCAGCCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAGCACCGCCAGAACAATTATATCATATGCTCCAATCCTCAAGATATAATTTTCCTGAGGCAGATTATGAAAAGATACAACCTTACACTCAACAGGAATGCCTACAATCTTGCTTGCACAATTGCATGTGTGCTGTTGCCATTTTCGGGCTGGACACTTGTTGGATGAAGAGATTGCCCCTTTCTAACGGAAGAGTAACCGATGTTAATGATCACCATTTTGTCTATATCAAAATAAGAAATAGTCGTGACTTTTATCCGGGTGTAAACGAGGAACTTCCCCCTGGTGCAGATTCAAATAAGGAAGATGGAGCTAAGCCAATTCTTATGGGATCACTTATTGGCTCCCTTGTCGTGAACGGTATTCTCCTGGCTACGGTTGCTTTGTTGGTTCTCTTGAAGCCGAAACTAAAAGTGGTTGTACCAGTTGCTGCTGCTAGTCTTTTGGAAACAAATTTGCATTCGTTTAGTTATGAGGCATTGAAAGAGGCCACATGGGGTTTTAGTGAAGAACTAGGCAGGGGTTCCTGTGGCATTGTTTACAAAGGCAAACTAGAAGCAGAAGATTCTTGTAATGTGATTGCCGTCAAGAGATTGGACAGATTGGCACAAGAACGAGAGAAAGAATTTAGGACTGAATTGAGTGCCATTGGTAAAACCTCCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGACCAGGGAATCAATAGACTATTGGTGTACGAGTTCATGAGCAATGGTACTCTTGCAGACATCCTATTTGGACACTCTAAACCCAATTGGAATACAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACACGAAGAGTGTGACACTCCAATCATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAACATTTCAATACCAAGATATCTGACTTTGGGTTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACGAATACGATGATCCGAGGAACTCGAGGATATGTAGCTCCTGAATGGTTCAAGAATGTCGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGATAATGTTGTTGGAAATTATTTGCTGCAGAAGAAGTGTGGTGATGGAGGAGCCCGGGGAAGAAGAGAAGGCAGTACTGGCAGATTGGGCTTGTGATTGCTATATGGAAGGGAGAATAGATGCTCTAGTGGAGAATGATGAGGAGGCCTTATCTGACAAAGAGAGGTTACGAAAATGGATCAAAATAGCAATATGGTGCATTCATGAGAATCCTGAAATGAGGCCAACAATTGGGATGGTCGTGCAAATGCTAGAAGGCTTTGTTCAAGTCTCTAACCCACCACCCACTTTTACCATGCATTCCGTATCTTGA 2430 0.4329 MAALNLNLLIVTLIYIHHVSLAFAKVTLNSPLFTDTDDAWLSPSGEFAFGFRQLNDNDTKLFMVAIWYNMIPDDQTVVWSARKDNKLATAPAGSKLQITQEGLSLTNPKGDFIWTASSKDFVSEGAMLDSGNFVLLNGSSANVWQSFEHPTDTLLPNQSLQLGGMLTSRLTDTNYTTGRFQLYFDGGNLLLSPLAWPSQLRYKSYPVIDASGNASRLLFNISGDIYVETTNGNRIQPQGQKWVSNSSSSLDLNPEMNFYRATLDPSGVFTQYAHPRNNTARQGWIIMRYVPDDICNIIFDRFGSGSCGYNSYCDMENERPTCNCLDGYSLVDPSNQFGGCQPNFTLACGADVQAPPEQLYHMLQSSRYNFPEADYEKIQPYTQQECLQSCLHNCMCAVAIFGLDTCWMKRLPLSNGRVTDVNDHHFVYIKIRNSRDFYPGVNEELPPGADSNKEDGAKPILMGSLIGSLVVNGILLATVALLVLLKPKLKVVVPVAAASLLETNLHSFSYEALKEATWGFSEELGRGSCGIVYKGKLEAEDSCNVIAVKRLDRLAQEREKEFRTELSAIGKTSHKNLVRLIGFCDQGINRLLVYEFMSNGTLADILFGHSKPNWNTRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEHFNTKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGIMLLEIICCRRSVVMEEPGEEEKAVLADWACDCYMEGRIDALVENDEEALSDKERLRKWIKIAIWCIHENPEMRPTIGMVVQMLEGFVQVSNPPPTFTMHSVS* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1759 809 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Gso1g1759 809 Gene3D Transferase(Phosphotransferase) domain 1 597 799 - -
Gso1g1759 809 Gene3D Phosphorylase Kinase; domain 1 488 596 - -
Gso1g1759 809 Gene3D - 22 148 IPR036426 -
Gso1g1759 809 ProSiteProfiles Protein kinase domain profile. 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1759 809 Pfam S-locus glycoprotein domain 246 329 IPR000858 GO:0048544
Gso1g1759 809 CDD STKc_IRAK 524 793 - -
Gso1g1759 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Gso1g1759 809 SMART serkin_6 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1759 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 170 IPR036426 -
Gso1g1759 809 Pfam Protein kinase domain 521 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1759 809 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 807 - -
Gso1g1759 809 SUPERFAMILY Protein kinase-like (PK-like) 502 791 IPR011009 -
Gso1g1759 809 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 807 - -
Gso1g1759 809 SMART blect_4 25 150 IPR001480 -
Gso1g1759 809 Pfam D-mannose binding lectin 76 162 IPR001480 -
Gso1g1759 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1759 Gso-Chr1 54392971 54396050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1759 504 792 Receptor kinase-like Gene Family AT1G60800 40.203 2.69e-63 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso1g1759 Pkinase 4.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1759 - - gmx:100789263 1615.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1759 1 54392971 54396050 Gso11g0317 11 2671479 2673790 GST