Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1736 ATGATTATAAAGATGAACTGTTTCTTCTTCAAAAACAAGTCAAAATCCGACCCAGAATTACCAAAGCGAAGGAAGAAGAGAAATCAGGTGGGCAATAATGGAGCAAGCAAGTCCTCCCCCAGCTCGCTACCATCGCCGAGAAGCATAAAAGAATTGTACAAAGAGAAAGAGCACAATTTCAGAATCTTCACTTTGCAAGAGATGGTAAATGCAACACATGGTTTCAATAGGATGCTCAAGATTGGAGAAGGGGGTTTCGGGAAGGTATATAGAGGAACAATTAAACCTGACCCTGAAGATGGAGCTGATCCTATTCTGGTCGCAATAAAAAAGCTTAACACGCGTGGCTTACAGGGACATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCGTCGTTAACCACCCGAATTTGGTTAAGCTTCTGGGATACTGCTCCGTAGATGGTGAAAAAGGAATCCAACGGTTGTTGGTGTATGAGTTCATGTCTAACAGGAGTCTGGAAGATCACCTTTTCAGTCTTTCTTTACCTCATTTGACTTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCTCAAGGATTACATTATCTACATAATGGACTGGAGGTTAAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGTTACTGGACAAGAAATTCCATCCCAAGCTTTCAGATTTCGGTCTTGCTAGGGAGGGCCCAACGGGTGATCAGACTCATGTATCTACTGCTGTAGTGGGGACACAGGGATATGCTGCTCCAGAGTATGTTGAAACAGGTCATCTCAAAATTCAGAGTGACATATGGAGTTTTGGTGTGGTACTTTATGAGATCCTCACGGGAAGGCGTGTATTGAATAGAAACAGACCAATAGGGGAACAAAAGCTTATAGAGTGGGTTAAAAATTACCCTGCTGACAGTAGCAGATTCAGCAAGATCATTGATCCTCGTCTCAAGAACCAATATTCACTTGGTGCTGCTCGAAAAGTAGCCAAATTGGCAGATAACTGCTTGAAGAAGAATCCTGAAGATAGACCATCCATGAGTCAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGGATTCAGAAACCAATACACTTAGCTCAATATGA 1119 0.4218 MIIKMNCFFFKNKSKSDPELPKRRKKRNQVGNNGASKSSPSSLPSPRSIKELYKEKEHNFRIFTLQEMVNATHGFNRMLKIGEGGFGKVYRGTIKPDPEDGADPILVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDGEKGIQRLLVYEFMSNRSLEDHLFSLSLPHLTWKTRLQIMLGAAQGLHYLHNGLEVKVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKIQSDIWSFGVVLYEILTGRRVLNRNRPIGEQKLIEWVKNYPADSSRFSKIIDPRLKNQYSLGAARKVAKLADNCLKKNPEDRPSMSQIVESLKQALQDSETNTLSSI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1736 372 CDD STKc_IRAK 81 359 - -
Gso1g1736 372 MobiDBLite consensus disorder prediction 31 46 - -
Gso1g1736 372 Gene3D Phosphorylase Kinase; domain 1 54 161 - -
Gso1g1736 372 PANTHER OS01G0588500 PROTEIN-RELATED 10 364 - -
Gso1g1736 372 PANTHER RECEPTOR-LIKE KINASE PLANT 10 364 - -
Gso1g1736 372 SUPERFAMILY Protein kinase-like (PK-like) 57 357 IPR011009 -
Gso1g1736 372 Gene3D Transferase(Phosphotransferase) domain 1 162 371 - -
Gso1g1736 372 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1736 372 Pfam Protein tyrosine and serine/threonine kinase 80 357 IPR001245 GO:0004672|GO:0006468
Gso1g1736 372 ProSitePatterns Protein kinases ATP-binding region signature. 81 111 IPR017441 GO:0005524
Gso1g1736 372 MobiDBLite consensus disorder prediction 14 47 - -
Gso1g1736 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1736 Gso-Chr1 54188650 54191424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1736 5 357 Glycoside Hydrolase AT3G07070 42.033 3.36e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso1g1736 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1736 - K00924 gmx:100305390 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1736 1 54188650 54191424 Gso1g1736 1 54188650 54191424 ECH
Gso1g1736 1 54188650 54191424 Gso11g0338 11 2831207 2833991 GST
Gso1g1736 1 54188650 54191424 Gso5g0582 5 6817525 6820741 PCT
Gso1g1736 1 54188650 54191424 Gso17g1265 17 12409971 12413088 PCT
Gso5g0582 5 6817525 6820741 Gso1g1736 1 54188650 54191424 PCT
Gso17g1265 17 12409971 12413088 Gso1g1736 1 54188650 54191424 PCT