Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1713 ATGACGTTACTAGGTTCTTTGTGGCTCATCCTAGTTGCAGCCTTGTTGGGTTATGCATTTCTATTAGGGCTTCTTAGGAGAGTGAATGAATGGTACTATGTTTCTAGGCTTCAGGGAAAGTTGCAACACCCTCTCCCACCAGGTCATCTGGGTTGGCCTTTATTGGGGAACATGCCCACCTTCCTCAGAGCTTTTAAGTCTAACCCTGATTCCTTCATCTATGACCTTGTTTCCAGATATGGCAGGACGGGTATGTACAGAACGTACTTGTTTGGGAGCCCCAGCATCATAGTTTGCACCCCAGAGACGTGCCGTAAGGTTCTCACAGATGATGAAAATCTCAAGCTTGGATACCCTCCTTCCACCACGGCCCTCACCGGAAAGAGATCACTCCATGGCATCTCAAATGCTGAACACAAGCGTCTTCGCCGCCTAATCACCTCTCCCATAACCGGCCACGAGGCATTGTCCACGTACATAGGTCTCATAGAACATGCTTCTGTGAAACGGTTGGAAGAGTTGTCTAGCATGAACACGCCTTGTGAGTTCCTCACAGAGTTAAGGAAGTTCGCTTTTAAGGTCTTCACCACCATCTTCATGGGCTCTGATGTTGATCATGTGGACCTGGCCTTGTTCGAAAACTTGTACAAAGATTTGAATCGGGGAATGAAGTCACTGGCTATCAATCTCCCAGGCTTTCCATTCTACAAAGCACTCAAGGCACGAAAGAAGTTGATGAAGTTGCTGCAAGGCTTGGTGGACCAAAAGAGAAGGACCAATAATACAATTACAAAAACAAAGAGGAGGAAATTAGATATGATGGATTTATTGATGGAAGTCAAAGATGAAGACGGTAGGCAGCTGGAAGATGAAGACATTATAGACTTACTTCTGGTTTTCTTGTTAGCTGGTTACGAAAGCTCTGCTCATGGAATATTGTGGACCATCATCTACCTCACAGAACACCCACTTGTCTTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATGGAAACAAGACCTTTATCACAGAAAGGGCTCAACCTTAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATCGACGAGATGCTGCGCAGAACAAGTATCTCTTTTGCGAACTTTAGACAGGCAAAGGTTGATCTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTAGTTTGGAACCGAGGGGTTCACATGGATCCTGAAACTTATCGCAATCCAAAAGAATACGATCCTTCAAGATGGGAAAATCACACGGCAAGAGCAGGTTCTTTCCTTCCGTTTGGATTGGGAAGCAGGTTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAATTAATCCAGATTGTCCAGCCACTTACCTACCGGTGCCAAGGCCTTCAGACAATTGCTCTGCAAGAATTATAAAAGCCACATAA 1482 0.4447 MTLLGSLWLILVAALLGYAFLLGLLRRVNEWYYVSRLQGKLQHPLPPGHLGWPLLGNMPTFLRAFKSNPDSFIYDLVSRYGRTGMYRTYLFGSPSIIVCTPETCRKVLTDDENLKLGYPPSTTALTGKRSLHGISNAEHKRLRRLITSPITGHEALSTYIGLIEHASVKRLEELSSMNTPCEFLTELRKFAFKVFTTIFMGSDVDHVDLALFENLYKDLNRGMKSLAINLPGFPFYKALKARKKLMKLLQGLVDQKRRTNNTITKTKRRKLDMMDLLMEVKDEDGRQLEDEDIIDLLLVFLLAGYESSAHGILWTIIYLTEHPLVFQRAKKEQEEIMETRPLSQKGLNLKEIKQMEYLSKVIDEMLRRTSISFANFRQAKVDLNINGYTIPKGWKVLVWNRGVHMDPETYRNPKEYDPSRWENHTARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERINPDCPATYLPVPRPSDNCSARIIKAT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1713 493 Gene3D Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 SUPERFAMILY Cytochrome P450 43 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PANTHER CYTOCHROME P450 88D6 23 470 - -
Gso1g1713 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gso1g1713 493 PANTHER CYTOCHROME P450 26 23 470 - -
Gso1g1713 493 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1713 493 Pfam Cytochrome P450 46 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1713 Gso-Chr1 53878568 53882014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1713 1 492 Cytochrome P450 AT2G32440 53.753 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1713 K04123 - gmx:100775911 797.349