Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1711 ATGGGAAGCAATGGATTCTGCAACCTTTTTTCTTGCTTCAAAGCCTCCTCCAACCACACTCCTAACCACAACCATAACCAAAACCAGCTGGTGTTTGCGGAGACGGAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTTAGATCTTCCGCTCGCTTTCTCTCTCCCTCCCATTCCGATCGCATCCTCTCTCCCTCCAACTCCCTCCGCTTCTCCCCTTCTCACCCCCCCGATTTACCCGAAACCGCATTCAAGGCCATTTCCGGCGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAAAACCGTCCTCCAGACCGACGATGACGATGGCGATGACACCGCCGTCAATGGCTTCAAAGGAACGTCTTCGTTTAGCGCCCTCCCGCTCCAGCCTGTTCCAAGAGGTGGAGGAGCTGAAGATAGAGAGAGGCGGGCGTTCTTCCTCTCGGGGCCAATTGAGAGCGGCACGGTCTCCGGACCCCTCGACGACGCCGTTTCGAGCTCCGAGGGAGTGCCCTTCTCTGCTCCGCTAGGTGGTTCAGTCTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCGGGGTTGAGAAAAGCCTTCCAGAGGAGTCTCTCTGAGAAGAAGCGCCCCTGGGTGGTTCCGATGGAAAGGAAGGGGAAGACGGAGGCAAAAGACGAGAGCGAAACCGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCAGGGGAGGACCGTGTGCATGTGGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTGGGGATTTACGACGGTTTCAATGGTCCTGACGCGCCCGAGTTTCTCATGGGTAATCTCTACCGTGCACTTCACAAAGAGCTCCAGGGTTTGTTTTGGGAGCTTGAGGAGCCAGAGCCGCAGGTGCAGGGAACTAATCCTGCACCTGCGGTTGAGGATAATGAGGCTGAATCCCACAATGACGGGGAGGTTGAAAAAGAGTCTAATTCTAATTCTCTCCAAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGAACTGAGAGTAGGAGGAGGAGGTTGTGGGAGTTTTTGGCTGAGGATGATGATGATGCTGAGGACGGGCTTGATCTTTCAGGGTCTGATAGGTTTGGGTTTACGGTGGATGATGCTCTCAGTGTTAGCAAGGAGGGTTCGGGGGGTAGTAGGCGGTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCACAGGGAGGGTCATGGGAGGAGGTTGTTCCCGTGGAGCTTGGGCGTGGGGGCGGAGGAGAAGAAGGTTGAGGAGGAAAATCCGGTGGCGGAGAAGGAGGAGGAGAAAAAGGGTCGTGGTGGGAGGAAGAGGAAGGTGGGGCCTGTGGATCATGAGTTGGTTTTGAGGGCGTTGTCTCGGGCGCTTGAGATGACCGAGCTTGCATATTTGGATATGACGGATAAGCTTATTGATACCAATCCGGAGCTTGCTTTGATGGGTTCGTGTCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTGATGAATGTCGGGGATAGCCGGGCCATTGTGGCACATTATGAGTGTGAAGAGGTTCATGCTAGTAAGGAATCTGGAGGCGGTGCAGACGTTGAGTCAAGTGAGGAGTGCATAGTGGAGGAGAACTTAGCTCCGGAAGAAGGTGCTGTTGTGTTGGGGAATGAGGGTCCCGCTCAAGAAAGGAGGTTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTGTTAGGATTAAGAATGAACATCCTGATGATAACCGATGTATTGTAAATGATAGAGTAAAAGGCCGTCTTAAGGTCACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTGGTACTAGAAATGTTTCGAAATGAATATATTGGCACAGCTCCATATATATCCTGCTGCCCTTCATTACGTCACCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTGTATCAATATCTTAGCAATCAGGAAGTGGTTTCTGAAGTTGAGAGTTTCGTGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTTCGTGCAGCTAAAAAAGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACCGTTATGGTGGTATCACTCGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2262 0.5155 MGSNGFCNLFSCFKASSNHTPNHNHNQNQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHPPDLPETAFKAISGASVSANSSVPKTVLQTDDDDGDDTAVNGFKGTSSFSALPLQPVPRGGGAEDRERRAFFLSGPIESGTVSGPLDDAVSSSEGVPFSAPLGGSVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPMERKGKTEAKDESETESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPEPQVQGTNPAPAVEDNEAESHNDGEVEKESNSNSLQGSVKRVTFQAEGTESRRRRLWEFLAEDDDDAEDGLDLSGSDRFGFTVDDALSVSKEGSGGSRRWLILSKLKHGLSRHREGHGRRLFPWSLGVGAEEKKVEEENPVAEKEEEKKGRGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECEEVHASKESGGGADVESSEECIVEENLAPEEGAVVLGNEGPAQERRLVALQLSTDHSTSIEEEVVRIKNEHPDDNRCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSEVESFVEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYP* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1711 753 PANTHER PROTEIN PHOSPHATASE 2C 24 751 IPR015655 GO:0004722|GO:0006470
Gso1g1711 753 SMART PP2C_4 226 739 IPR001932 -
Gso1g1711 753 MobiDBLite consensus disorder prediction 296 341 - -
Gso1g1711 753 CDD PP2Cc 457 741 IPR001932 -
Gso1g1711 753 MobiDBLite consensus disorder prediction 428 452 - -
Gso1g1711 753 Gene3D - 198 388 IPR036457 -
Gso1g1711 753 Gene3D - 399 748 IPR036457 -
Gso1g1711 753 MobiDBLite consensus disorder prediction 324 340 - -
Gso1g1711 753 PANTHER PROTEIN PHOSPHATASE 2C 29 24 751 - -
Gso1g1711 753 SUPERFAMILY PP2C-like 239 742 IPR036457 -
Gso1g1711 753 Pfam Protein phosphatase 2C 567 709 IPR001932 -
Gso1g1711 753 ProSiteProfiles PPM-type phosphatase domain profile. 226 741 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1711 Gso-Chr1 53858828 53864151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1711 1 752 PP2C-type Phosphatase Gene Family AT2G35350 55.706 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1711 - - gmx:100775371 1423.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1711 1 53858828 53864151 Gso11g0363 11 3133155 3138672 GST
Gso1g1711 1 53858828 53864151 Gso5g0972 5 31944469 31949877 PCT
Gso1g1711 1 53858828 53864151 Gso17g1297 17 12904051 12908997 PCT
Gso5g0972 5 31944469 31949877 Gso1g1711 1 53858828 53864151 PCT
Gso17g1297 17 12904051 12908997 Gso1g1711 1 53858828 53864151 PCT