Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1674 ATGGCTGGTAGTAGTTCAAAGCCAGTGATATGTCCGCGAAGCCAGGGACAAACTTGGCTTTCCCATGGCCCCACTTCCAATTACCACTCCTTCAATCATCTTGTTTCAAGAGGAGGAATTGGAAGGCTCAGTCGTTGTTGTTGTACTTTCAATTTCAGGTTAAGAAAGAGCAAAACGGCTGCGTTTTCGGTCATGAGAAACTTTGGCGTGACGACGGAGGAAGACCATGAGTTCGTGAAGGCTCTCAGGGAATCCCAACCTTACGTTTCGGTCCACAGGGGCAGACTATTCGTTCTGCTCATATCCGCTGAACTTGTTGCTAGTCCTTACTTCAATCCCATTCTCAAGGATATAGCTTTCCTTAATCACCTAGGTATCCGCTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGATGAATCTCTGGAAGCTGCGATGGAAGCAGCTGGAGGCATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCTATATGCAATATTCGTCGACATGGTGACAATAGTCGATGGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATATTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACTTATGAAGTTGCCACAGCTTGTGCCTTGGCTATAGGGGCAGACAAATTAATATGCCTTATAGATGGTCCAATACTTGATGAGAGTGGACGCTTAATTCGTTTCTTGCCACTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAACTCTCTTGAGTATAACAATTTTAATGGAGCAGTCAAATCACCACCTATTGGACGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAGTGGAAATGGCTTAGGGTCTGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAACGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACCATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGGGGTAAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTAAAAACATTGGATTCGTTCATTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGAGAGGTTGCTTGTATTGCAGTATCTCCTGATTGCCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTTCCTTCTTACAACACGTACAGCAGATTGGTTTGTAAGGCGTGGATTTTCGGAATGTTCAATTGATTATCTTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTGCCAAATATTAGTGGAATTACTGTTGGTGTAAAATCTGCTTCAAGTTAG 1818 0.4318 MAGSSSKPVICPRSQGQTWLSHGPTSNYHSFNHLVSRGGIGRLSRCCCTFNFRLRKSKTAAFSVMRNFGVTTEEDHEFVKALRESQPYVSVHRGRLFVLLISAELVASPYFNPILKDIAFLNHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDESGRLIRFLPLQEADMLIRKRAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVKSPPIGRFTEWHNATFHNGVGFESGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAGVKDISGIKQLIQPLEASGILVKRTDEELLKTLDSFIVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYLPEKKRRMINLSRNSKYYMKKLLPNISGITVGVKSASS* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1674 605 Hamap Amino-acid acetyltransferase [argA]. 72 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso1g1674 605 Gene3D - 76 442 IPR036393 -
Gso1g1674 605 SUPERFAMILY Carbamate kinase-like 391 439 IPR036393 -
Gso1g1674 605 SUPERFAMILY Carbamate kinase-like 75 313 IPR036393 -
Gso1g1674 605 CDD NAT_SF 484 546 - -
Gso1g1674 605 Pfam Acetyltransferase (GNAT) family 480 548 IPR000182 GO:0016407
Gso1g1674 605 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 398 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso1g1674 605 Pfam Amino acid kinase family 111 311 IPR001048 -
Gso1g1674 605 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 443 591 IPR000182 GO:0016407
Gso1g1674 605 Gene3D - 443 589 - -
Gso1g1674 605 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 65 599 - -
Gso1g1674 605 PANTHER AMINO-ACID ACETYLTRANSFERASE 65 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso1g1674 605 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 446 591 IPR016181 -
Gso1g1674 605 CDD AAK_NAGS-ABP 77 437 IPR033719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1674 Gso-Chr1 53394599 53401874 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso1g1674 AA_kinase 8.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1674 K14682 - gmx:100777694 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1674 1 53394599 53401874 Gso17g1350 17 13881100 13888857 PCT
Gso17g1350 17 13881100 13888857 Gso1g1674 1 53394599 53401874 PCT