Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1662 ATGACTAGCATGGGCGAGAATTGTTTTAAGCCTCTCCAAAATACTAAGAAAATAACTCCGATGCCACCTCCCATGCCCCGTTTTGCAGCCACGAGTTGTCCTTGTAAGTGTTTGGTGTCAAAAAATTCAACACCACCAAGAGGGCGCAACAATAATGTCTCTCCAGCAGCAATAGAATTTTGGGAGCGTCTTTTTTATCAAGGTTATAAAGCAGATGTTTGCATTAATACTGATAACGGTGGCGTTGTTTATGCTCATTCTAACATTCTTGCCATGTCTACTCCTGTTTTCCGGGGCATGTTGAAGCAAGCAAATTGTCATCGTCGATGGCGAACAATCTCAATTACTGGGGTTCCACATGATGCAGTTCAAGTTTTTATTCGATTCTTATACACTTCCAGTTATGAGAAAGAAGAAATGGATGAATTCGTCCTACCTCTGTTGGTGTTGTCACATGTATACGTCGTCCCTCACTTGAAGCGTGAATGTGAACAGAAGTTAGAACTGAGTTTACTCACCATAGATAATGTGGTGGATGTATTTCAACTTGCCCTACTTTGTGATGCACCAAGACTTAGCCTTATTTGTCACCGAAAGGTGCTGAAAAACTTCAAAGTTGTTTCAGAAACAGAAGGATGGAAAACAATGAAGTTGAGCCACCCAGCTCTAGAAAAGGAAATTGTCGAGTCAATGGTCGATGAAGACATTATTAAAAAGGAGAAAATCAGAAAAAATAAGGAAAGAGAGATATATTTGCAATTATACGAGGCCATGGAAGCCCTTGTTCACATTTGTAGAGATGGTTGTCGAACTATTGGTCCTCACGACAAAGACTTCAAAGCAAACCAACCATGTAAGTATACAGCATGCAACGGATTAGAATTGCTTGTTCGTCATTTTGCTGGATGCAAGTTGAGAGTCCGTGGAGGTTGTGTTCATTGCAACAGGATGTGGCAATTATTGGAGTTACACTCTCGATTATGTGTTGATCCTGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAAGAGCGAATATCAAAACAAAACAAGAAAGACGAAATTAGGTGGAAAATATTGGTTCAAAAGATCTTGAGAACAAGAGGAATTGGGATAGCATCATGCTTTCTGCCACAATAA 1140 0.4 MTSMGENCFKPLQNTKKITPMPPPMPRFAATSCPCKCLVSKNSTPPRGRNNNVSPAAIEFWERLFYQGYKADVCINTDNGGVVYAHSNILAMSTPVFRGMLKQANCHRRWRTISITGVPHDAVQVFIRFLYTSSYEKEEMDEFVLPLLVLSHVYVVPHLKRECEQKLELSLLTIDNVVDVFQLALLCDAPRLSLICHRKVLKNFKVVSETEGWKTMKLSHPALEKEIVESMVDEDIIKKEKIRKNKEREIYLQLYEAMEALVHICRDGCRTIGPHDKDFKANQPCKYTACNGLELLVRHFAGCKLRVRGGCVHCNRMWQLLELHSRLCVDPDYCRVPLCRNFKERISKQNKKDEIRWKILVQKILRTRGIGIASCFLPQ* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1662 379 ProSiteProfiles BTB domain profile. 71 139 IPR000210 GO:0005515
Gso1g1662 379 SUPERFAMILY TAZ domain 248 348 IPR035898 -
Gso1g1662 379 Gene3D Potassium Channel Kv1.1; Chain A 47 172 IPR011333 -
Gso1g1662 379 SMART TAZ_2 248 340 IPR000197 -
Gso1g1662 379 SUPERFAMILY POZ domain 49 167 IPR011333 -
Gso1g1662 379 Pfam BTB/POZ domain 66 168 IPR000210 GO:0005515
Gso1g1662 379 Pfam TAZ zinc finger 255 339 IPR000197 -
Gso1g1662 379 Gene3D TAZ domain 246 367 IPR035898 -
Gso1g1662 379 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 377 IPR044513 -
Gso1g1662 379 CDD BACK 173 230 - -
Gso1g1662 379 Gene3D - 173 245 - -
Gso1g1662 379 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 7 377 - -
Gso1g1662 379 SMART BTB_4 71 171 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1662 Gso-Chr1 53294294 53299774 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso1g1662 BTB 1.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1662 - - gmx:100807461 761.525