Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1661 ATGAAAGCTCTTCACTTGAGCTTCTACTTCTACATCATCGTCTTCACACTATCCCTATTCCTCTCCTTTCAAGTCAACACTGTAAAAGGGGTCAACAACACCAGCGCCAATGAATCTGGCAATAGAAGAATTCTGCACCAGCCATTGTTCCCGGCGAGTTCCGCTCCACCGCCAGCAGGCACGGCGTCACCACCGCCACCACCGGCGGTGGAAACCCCTCCATCTCCGGACGGCGGCAACATCCCCTTCTTCCACGAGTACCCGGCGGATCAGAACCAACAAGCAGCACCGTCGTCCACGGTGAACTCCTCAATCGCAAACCCAACGGCAACACAGCCAACAAAGGGAACAAAGAAAGTAGCAATCGCGATCTCCGTTGGAATTGTGACGCTTGGGATGCTCTCAGCACTCGCCTTCTTCTTATACAAACACAGAGCAAAACATCCCGTGGAGACTCAAAAGTTCGTAGCTGCTGGGAGTGGGAACAACAATAACAACAACCCACCAAACAGGAACAGCAACAGCAACGAGGATGCAAACACAACTTCGGCACCATCGAGTTTCCTCTACATTGGAACCGTTGAACCCACGGTTTCACGAGATGCTAATAAGCCCAACCGATCGCCCTATCACAAGCTCAAGCGATCCGATCGCTACCGGCCCAGTCCCGAATTGCAGCCAATGCCGCCGCTCACTAAGCCTCCCGGCGGGAATTACCCGCCAGCTTTGTCTTCCTCGCCCGAGTCCGACGAGGAGAGCCGCGAGACGGCGTTTCACTCGCCGCAGAACTCGTCCATCGATGGCTACTACACGCCCGCTTCGCGGCATAGCTCTCTCGTCAACGGTAGTCCTGCGAAGAGAGAAACGAATTCCACTCCCGCACCCGTTGTTGTTCCGTTCTCCAAGAGAACTTCGCCCAATTCACGCGTTTCCGCACCCTCGCCGGAGATTAGACACGTCATCATACCGTCTATAAAGCAGCCTCCACCACCGTCGCCGCCGCCACCTAAGCATTCCCTAAAGCCAGAATTCTCGGCGCCTCCCCCACCTCCGAATTTGAAGCGTCTTCAGTCAACAACAACAACAACCGACACTGCTTTGCACGTGTCAAGGACTTCACTTAATCCTCCTCCACCACCGCCACCTCCTCCGCCGCCGCCACCTCCACCGCTGCAGCAAAAATCAGTGTCTCCGGCGGTTAGTGCTTCTTCTAATTCTGCATCTGTAAAGCGACAATCTTGGTCACCAGTTCAATGTAGTGTGACGAAAGGTTCAGATGGGGTTGAACAAAGTCAAAGTGTGAGCTCTTCCGAGAGGCATGAAGCCAATGACACGGATGGAGCCAAACCAAAATTGAAAGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACTGTGTGGGACCAGATCAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAATCGTTGTTTGGATGCAAAGCCACGAATTTTACCCCCAAAGAACCTCCCAGAAAAAAATCAGTTCTTCCTTCGGTTGATCAGGAGAACAGGGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATTCTTCTCAGGGCTTTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGCACTGAGCTATTGGAAACCCTAGTGAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTTAAAAACTATGACGGCGATCTCTCAAAACTTGGAGCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTATATAGAGCCAACTTTGACGCAGAAGTTAACTACCTTAGACAGTCTTTTCAAACCATGGAGGCTGCAAGCGAGGAAATAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACTAATCGAGGGGATGCTAAAGCTTTCAAATTGGACACACTTCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAAATCATTAGATCTGAAGGTGCTGGAGCTGAATCTGCAAATGATAATGTGAAGATGGATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGTTTGCGGGTTGTGGCAGGGCTCAGTAGAGATCTTAGTGATGTAAAAAAAGCAGCAGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGCCTTGATAAAGTGCGATTGGTTTTGCAATATGAAAAGCCAGATATGCAAGGCAATTTCTTTAACTCCACAAAGCTATTTCTGAAATATGCTGAAGATGAAATTGTAAGGATTAAAGCAGATGAGAGAAAAGCCTTGTACCTTGTAAAAGAAGTTACAGAGTACTTTCATGGGAATGCAACAAAGGAAGAAGCCCACCCTCTCAGAATTTTCATGATTGTAAGAGACTTTCTGAATATCTTGGATCTAGTGTGCAAAGAAGTGGAAAAGATGCACGATAGAATCGTTGGTGGTTCTGGCAGATCCTTCCGAATACCTCCAAATGCATCATTACCTGTTCTCAACAGATACAATCATCCAAAGCAGGATAGAAGCTCAGATGAGGAGAGCTCATCCCCCTAG 2673 0.4792 MKALHLSFYFYIIVFTLSLFLSFQVNTVKGVNNTSANESGNRRILHQPLFPASSAPPPAGTASPPPPPAVETPPSPDGGNIPFFHEYPADQNQQAAPSSTVNSSIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKFVAAGSGNNNNNNPPNRNSNSNEDANTTSAPSSFLYIGTVEPTVSRDANKPNRSPYHKLKRSDRYRPSPELQPMPPLTKPPGGNYPPALSSSPESDEESRETAFHSPQNSSIDGYYTPASRHSSLVNGSPAKRETNSTPAPVVVPFSKRTSPNSRVSAPSPEIRHVIIPSIKQPPPPSPPPPKHSLKPEFSAPPPPPNLKRLQSTTTTTDTALHVSRTSLNPPPPPPPPPPPPPPPLQQKSVSPAVSASSNSASVKRQSWSPVQCSVTKGSDGVEQSQSVSSSERHEANDTDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNFTPKEPPRKKSVLPSVDQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGAAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNYLRQSFQTMEAASEEIKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANDNVKMDSKFNEDEFKKQGLRVVAGLSRDLSDVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDMQGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNATKEEAHPLRIFMIVRDFLNILDLVCKEVEKMHDRIVGGSGRSFRIPPNASLPVLNRYNHPKQDRSSDEESSSP* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1661 890 Pfam Formin Homology 2 Domain 445 838 IPR015425 -
Gso1g1661 890 MobiDBLite consensus disorder prediction 355 372 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 205 221 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 324 354 - -
Gso1g1661 890 SUPERFAMILY Formin homology 2 domain (FH2 domain) 379 849 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 373 394 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 157 450 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 91 117 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 157 204 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 48 117 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 868 890 - -
Gso1g1661 890 Gene3D Formin, FH2 domain 438 850 IPR042201 -
Gso1g1661 890 SMART it6_source 442 853 IPR015425 -
Gso1g1661 890 MobiDBLite consensus disorder prediction 51 75 - -
Gso1g1661 890 ProSiteProfiles Formin homology-2 (FH2) domain profile. 442 864 IPR015425 -
Gso1g1661 890 PANTHER FORMIN-RELATED 2 890 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso1g1661 890 MobiDBLite consensus disorder prediction 223 241 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 395 438 - -
Gso1g1661 890 MobiDBLite consensus disorder prediction 258 312 - -
Gso1g1661 890 PANTHER FORMIN-LIKE PROTEIN 2 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1661 Gso-Chr1 53284321 53289723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1661 425 880 FH2 protein (formin) Gene Family AT5G67470 71.367 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1661 - - gmx:100806929 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1661 1 53284321 53289723 Gso11g0419 11 3665725 3671008 GST
Gso1g1661 1 53284321 53289723 Gso5g0909 5 29774563 29779871 PCT
Gso1g1661 1 53284321 53289723 Gso17g1361 17 13997187 14002210 PCT
Gso5g0909 5 29774563 29779871 Gso1g1661 1 53284321 53289723 PCT
Gso17g1361 17 13997187 14002210 Gso1g1661 1 53284321 53289723 PCT