Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1658 ATGGGTGAGGATTTATCATCTACGTTGGTTGTGAGAGAGTTCGACCTGAATAAAGACCGAGAGAGAGTAGAAGCCGTTGAAAGGTCGTGTGAGGTTGGACCCAGCGGCAAGCTTTCTCTCTTCACCGACATGCTCGGCGACCCAATTTGCAGGGTCCGCCATTCACCTGCTTTTCTAATGCTGGTAGCGGAGATTGGTGGAGAATTAGTAGGAATGATAAGAGGTTGCATTAAAACCGTGACATGCGGAAAAAGGCTCTCCAGAAACGGAAAACACAACAACACTAACGCCAAACACGTCCCAGTGTATACCAAAGTCGCATATATACTAGGCCTTCGTGTTTCTCCTAATCGACGTAGAATGGGAATAGGATTAAAGCTAGTGCGTAAAATGGAGACTTGGTTCAGGGATAATGGAACAGAATACTCCTACATGACAACGGAAAAGAACAATTTGGCGTCTGTTAAACTCTTCACCGATAAATGCGGGTATTCAAAGTTTCGTAACCCCTCCATCCTTGTCAACCCCGTATTTGCCCATCCAGCAAGGGTATCCCCAAAGGTGAGAATCATAAGTCTTTCCCCTTCCGAGGCCGAGGTACTCTACCGACACCATTTTGCCACGACAGAGTTTTTTCCACGCGACGTTGACTCTGTTCTGAACAACAAGTTGAACCTAGGGACGTTTCTGGCTGTCCCAAATGAGTCCTACAAGTCTGACATATGGCTCGGCCCAGATCTTTTTCTGTCGGACCCACCACATTCCTGGGCCATGGTGAGCGTGTGGAACTCAAAGGAAGTGTTCACGTTCGAGTTGCGTGGTGCGTCGCGCGTGAGCCGCACGCTTGCTAAGACAACGCGGGTGGTGGACCGGGCCCTGCCCTGGCTGCGGTTACCATCGATGCCAGACCTGTTCAGGCCGTTCGGGTTTCACTTCATGTACGGGTTGGGAGGGGAAGGCCCAGAGGGCGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCACAACCTCGCCATGGAAAAAGGGTGCAGGGTGTTGGCCACGGAAGTGTCCCCAAACGAGCCCTTAAGGTTTGGGATACCCCACTGGAAGATGCTGTCGGGTGAAGATTTATGGTGTATGAAGCGGTTGGGCGAGGATTACAGCGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGCATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1218 0.5123 MGEDLSSTLVVREFDLNKDRERVEAVERSCEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGGELVGMIRGCIKTVTCGKRLSRNGKHNNTNAKHVPVYTKVAYILGLRVSPNRRRMGIGLKLVRKMETWFRDNGTEYSYMTTEKNNLASVKLFTDKCGYSKFRNPSILVNPVFAHPARVSPKVRIISLSPSEAEVLYRHHFATTEFFPRDVDSVLNNKLNLGTFLAVPNESYKSDIWLGPDLFLSDPPHSWAMVSVWNSKEVFTFELRGASRVSRTLAKTTRVVDRALPWLRLPSMPDLFRPFGFHFMYGLGGEGPEGVKMVKALCGFAHNLAMEKGCRVLATEVSPNEPLRFGIPHWKMLSGEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1658 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016407
Gso1g1658 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 165 IPR016181 -
Gso1g1658 405 PANTHER N-ACETYLTRANSFERASE 8 404 - -
Gso1g1658 405 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 8 404 - -
Gso1g1658 405 Gene3D - 18 169 - -
Gso1g1658 405 Pfam Acetyltransferase (GNAT) family 53 164 IPR000182 GO:0016407
Gso1g1658 405 CDD NAT_SF 60 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1658 Gso-Chr1 53256808 53258909 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso1g1658 Acetyltransf_1 2.1e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1658 - - gmx:100817251 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1658 1 53256808 53258909 Gso11g0421 11 3698231 3700317 GST
Gso1g1658 1 53256808 53258909 Gso5g0906 5 29691225 29693288 PCT
Gso1g1658 1 53256808 53258909 Gso17g1364 17 14088478 14090674 PCT
Gso5g0906 5 29691225 29693288 Gso1g1658 1 53256808 53258909 PCT
Gso17g1364 17 14088478 14090674 Gso1g1658 1 53256808 53258909 PCT