Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1646 ATGGCTTATCTCGCCGTCGCCGGTGCCGGATACAGCTCAGTCGCCGGAATCAATAACCGGAGGCCAAATTTTTTCATACCAATTATACCAAACAACACCATTTCAACGCTCTATTCCGTCGCATCTCTGTGCCGGTGCTGCAGAGAACATGGCTTCAGTAGCGCTTCCGAATCCGCTTGGACAGATTTTCCCGTTGAGAACGCGTACGAGCTGTTAGGAGTGTCCGAGACGAGCTCCTTTGACGAGATTAAAGCGTCGTTTCGCAAATTGGCCAAAGAGACTCACCCGGACCTCGCTGAGTCAAGGAACGATTCCACTGCGTCTCGACGATTTGTACAAATTCTGGCTGCCTATGAGATTCTTTCAGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAACTTATGCAAAGGCATTCTGGACAGGGTTCAAAACTGCATATTTACAAATCACAGGCTACTACATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAATGGTACAGGTTAACTATAAATAATATTTTGGCAGAAAAGAAGGTGGTAGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTATTCAGCTATTCATGCAGCATACTATGGTCCTGAAATTGATTCCATGGAGCTTCTTCCTGACTGCTTTGAGGCTGAGGAGAGGTCCTCCTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGACGTGATCTTTTTGGGATGGTTTGCCTAGCCAACAGGGTTCCAGAGATATCAATTACTAACAATGAGAAGTTAACTTCTTTTAGGTCCTTCCATTCAGGCCTGTGTCAATCTATAACACATTTGAATGTCCACAGGAATGCAGAAAGATCAGATGATTTTGAAACTCATCAAGGTCACAGCTCTAAAACTTCAAGTATTGTATCAGATGCATATAGACATCTAGAATTGCACATCAGTGGAAGAGTGGTTGCTACAGCATCTAGGGCACTACCTAGATGCTGTTCTGATGAGATGCAGACAGAAGATACTGAAGATCACATTCATGTGTTCCTTAATTTATATGAAGATCCCAAACATATCAGCAGTGATTTTTGGAAAGATTACCTTGCAAATGGTGCAGTTGGAAGAAGAATTCGTTTGGGAAGCATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTGTTGTTATGTCTACAATGATAAGGGTACAAAGACCCATGTGATTATGAAGCATAGAACATTGATGGTAAAGCATATGCACTGGTATGAAGTGGGTGAGAAAGTTTCAGTTTGTGAATGTAGATGCACTAGAGCACGTTTACCCCCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAATGGTCGTACAATGCCATCACAAAGGTTCTGGGATGGCTTGGACTATAGCGAGCAAGCTGACAGAAGACTCCATCCAGCAATGTATTTGTTTGCTCTTGCATATCGGACACTTGATCTTGAATATGCCAAAGCAAGCAAGAGATCATTTAGGAATGTTGTTGGAGCACAAATGTTCCGAATTCTTCATTGGTGCAAGAAACTTGTTCAATAG 1626 0.4237 MAYLAVAGAGYSSVAGINNRRPNFFIPIIPNNTISTLYSVASLCRCCREHGFSSASESAWTDFPVENAYELLGVSETSSFDEIKASFRKLAKETHPDLAESRNDSTASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQRHSGQGSKLHIYKSQATTFKEMEVVEWLKWYRLTINNILAEKKVVVGTGYFDVLERDFYSAIHAAYYGPEIDSMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLANRVPEISITNNEKLTSFRSFHSGLCQSITHLNVHRNAERSDDFETHQGHSSKTSSIVSDAYRHLELHISGRVVATASRALPRCCSDEMQTEDTEDHIHVFLNLYEDPKHISSDFWKDYLANGAVGRRIRLGSISGLGSSPDEGCCYVYNDKGTKTHVIMKHRTLMVKHMHWYEVGEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKNGRTMPSQRFWDGLDYSEQADRRLHPAMYLFALAYRTLDLEYAKASKRSFRNVVGAQMFRILHWCKKLVQ* 542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1646 541 CDD DnaJ 67 123 IPR001623 -
Gso1g1646 541 Pfam DnaJ domain 67 131 IPR001623 -
Gso1g1646 541 Gene3D DnaJ domain 58 155 IPR036869 -
Gso1g1646 541 ProSiteProfiles dnaJ domain profile. 67 134 IPR001623 -
Gso1g1646 541 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso1g1646 541 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso1g1646 541 PRINTS DnaJ domain signature 106 126 IPR001623 -
Gso1g1646 541 SMART dnaj_3 66 126 IPR001623 -
Gso1g1646 541 SUPERFAMILY Chaperone J-domain 65 137 IPR036869 -
Gso1g1646 541 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 47 540 - -
Gso1g1646 541 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso1g1646 Gso-Chr1 53122043 53129203 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1646 69 133 C2H2 Transcription Factor Family AT1G74250 44.118 9.81e-10 59.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1646 - - gmx:100805332 1076.23
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1646 1 53122043 53129203 Gso11g0433 11 3809386 3817150 GST