Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1639 ATGCCTCCTCAAGAGACCCAACAACCTCTGTTATCGGAGGAGCAAGAAGAGACAGCCTACGATTCCTCGGAGAAGGTTGTGGTGGTCGGAATCGACGAGCACGACGGCGACTTGGAGGCGCCGCCGTTCTCATGGCGGAAGCTGTGGCTCTTCACCGGGCCCGGGTTTCTGATGAGCATCGCTTTTCTGGATCCCGGGAACCTCGAGGGGGATCTTCAGTCCGGTGCCATTGCTGGGTACTCGCTCCTGTGGCTCCTCATGTGGGCCACGGCTATGGGCCTTCTTATCCAGCTTCTATCGGCTCGGCTCGGCGTGGCTACGGGGAGACACTTAGCCGAACTCTGCAGGGAAGAGTATCCCACATGGGCTAGGATTGTTCTGTGGTTGATGACTGAGGTTGCTCTTATTGGCGCTGACATACAAGAGGTTATTGGGAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCGCTCTGGGCCGGGGTCGTCATTACAGCTTTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAACTGGAAGCGTTTTTCGGTGTTCTTATTGGTGTAATGGCTCTCTCATTTGCTTGGATGTTTGGTGAAGCTAAGCCCAATGGTGTTGATGTTCTTGTTGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTGGGTTGCGTTATTATGCCTCACAATGTGTACTTGCATTCTGCGCTTGTTCAATCAAGAAGGGTTGACCCCAGCAAGAAAGGCCGTGTTCAGGAAGCTCTTAATTACTACTCCATAGAGTCCACCATCGCCCTTATAGTGTCCTTTGTCATTAATATATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACTGAAATAGCAAATAGCATTGGTCTTGTAAATGCAGGGCAGTACCTTCAGGAGAAGTATGGGGGTGGACTATTCCCAATCCTGTATATATGGGGTATTGGGTTGTTAGCAGCCGGCCAGAGTAGCACAATTACTGGTACATATGCTGGACAGTTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAGTGGATGAGGGCATTGATAACACGAAGTTTTGCCATCATCCCAACCATGATAGTTGCTCTTATATTTGATACCTCAGAGGAATCATTAGATGTTCTGAATGAATGGCTTAATGTTCTCCAGTCAGTTCAAATCCCCTTTGCACTTGTTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGCAGTTTCAGAATTGGCCCTGTCCTCAAGATTATTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAATGGCTATCTATTGCTGGAATTCTTCTCTTCTGAAGTGAATGGGGCAGTGTTTGCCACTGTAGTGTGTGTATTAACAGCTGCGTATGTTGCATTTGTACTTTACCTTATTTCACGGGCCATTACCTATACACCGTGGCAAAGGTTAACCCGATCAAAGACAGTTGCTACCACAGTGAATTGA 1524 0.4705 MPPQETQQPLLSEEQEETAYDSSEKVVVVGIDEHDGDLEAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARIVLWLMTEVALIGADIQEVIGSAIAIRILSNGVVPLWAGVVITAFDCFIFLFLENYGVRKLEAFFGVLIGVMALSFAWMFGEAKPNGVDVLVGILVPKLSSRTIQQAVGVVGCVIMPHNVYLHSALVQSRRVDPSKKGRVQEALNYYSIESTIALIVSFVINIFVTTVFAKGFYGTEIANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEESLDVLNEWLNVLQSVQIPFALVPLLCLVSKEQIMGSFRIGPVLKIISWLVAALVIVINGYLLLEFFSSEVNGAVFATVVCVLTAAYVAFVLYLISRAITYTPWQRLTRSKTVATTVN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1639 507 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 7 507 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 7 507 - -
Gso1g1639 507 MobiDBLite consensus disorder prediction 1 21 - -
Gso1g1639 507 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 Hamap Divalent metal cation transporter MntH [mntH]. 34 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso1g1639 507 Pfam Natural resistance-associated macrophage protein 69 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1639 Gso-Chr1 53053241 53056813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1639 1 493 Inorganic Solute Cotransporters AT2G23150 79.084 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1639 K21398 - gmx:100807811 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1639 1 53053241 53056813 Gso11g0441 11 3875042 3878426 GST
Gso1g1639 1 53053241 53056813 Gso5g0876 5 28901396 28906304 PCT
Gso1g1639 1 53053241 53056813 Gso17g1400 17 14867071 14871675 PCT
Gso5g0876 5 28901396 28906304 Gso1g1639 1 53053241 53056813 PCT
Gso17g1400 17 14867071 14871675 Gso1g1639 1 53053241 53056813 PCT