Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1615 ATGGCGTCGAAGCCTTCGCCTTCGCCCTCGCCCTCTTCTTCCAGATCAGAGCCTCTCGTCGATCCCTCCGCGAATAAAGTGGAGGGTTCAAGTCCGACTGCTAAAGATGTGCTGCTGGTTATTGATTCTTTGAAGAAACAAGTTGCTGCAGAACGAGTTGTTTATGTAAAGAAAAGAATAGAGGAAAGCAGACAGAAGCTGGTTGGTGTCACTAACCATCTCTGCACAATGTCAACGGAGAGAAGGAACTGCAGCATTACTGATACGAATAGAAGTCTGGACCTACTGACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCGAGTAATGGTGACGTGGAGAGCAACGGCTATCATGATGATAACCATGGTTCTACAGCAGTTCTTCTAGGGTCTAATGTTGCCGTAAAGAATGCTGTTCGTCCCATCAAGTTACCTGAAGTAAAAAAATTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACCGAGGATCAGTCAGTTGTAGGCCGGAGACGAATTTATTATGATCAGAATGGTGGAGAAGCACTGATTTGCAGTGACAGTGAAGAGGAAACTATGGATGATGAAGAGGAGAAAAGAGAATTCATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAGTTTGGTTTAACTGACATTGTTCTGGAGTCGTTGGCTCAGTGTTTTTCTAGAAACACCAGTGAAATTAAGGCAAAGTATGAAACCCTCAGTATTCATGACAATGCTGGCGGGTGTTCCAAGGCTGGAGATTCTGAAGAGAATTCTCAAAGTGGCAATTTTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTCGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTACATGGAACCCTCCTGATACCGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTACTTAAGTCAGAAAGATTTGCCAAAACATCCTCTGCCCAGGCTGATGAAGAGAAGTCCTCTGGTGGTGCTTTATCTAGGAAGAAGTCTTCTGCTAAGAGGCGGATAAAATGTAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAGAACATATCAGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTGTCTCAGCCTCCCGCTCAGCACCTCCTAAAACTAAACCTGTGGGGAAAGGTGGAATTGGTAAAAGGAACAGTAAGCGAGTGGCAGAACGAGTCCTAGTATGCATGCAGAAACGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGACCGTTCATCGAATGATATGGTCACTGACCCACATGCCATGAGCAGTGAAGACAACATGAGGAAAGAAGAGTTTGTAGATGACAATGTTTGTAAACCAGAAATCACAGATAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGCCTAAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATGTCTGGTCCTCCTGGGGATGTTGCAAATTCCCTCATGGACTGCTATTCCAAGGGTACTAATGAAGTGAGACGAAGGTCTAGATTCTTACGTAGAAGAGGAAGAGTTCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGGATTACAGAGAGAAAGGATCAGCCTTGCCGGCAGTATAATCCATGTGGTTGCCAATCGGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCAGAAGTCGTCAATGTCCATGTTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACACTAGGGATTCCTAGCCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATATATCAGGTTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTCAATTTGAACGATCAGTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAACCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCCGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCCGGGGAGGAGCTGTTCTATGATTATCGTTATGAGCCAGATAGGGCTCCTGCGTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2586 0.4335 MASKPSPSPSPSSSRSEPLVDPSANKVEGSSPTAKDVLLVIDSLKKQVAAERVVYVKKRIEESRQKLVGVTNHLCTMSTERRNCSITDTNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGYHDDNHGSTAVLLGSNVAVKNAVRPIKLPEVKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEETMDDEEEKREFIESEDYILRMTVKEFGLTDIVLESLAQCFSRNTSEIKAKYETLSIHDNAGGCSKAGDSEENSQSGNFFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPTWNPPDTENAPCGPNCFRSVLKSERFAKTSSAQADEEKSSGGALSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGPGRDAVSASRSAPPKTKPVGKGGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALDRSSNDMVTDPHAMSSEDNMRKEEFVDDNVCKPEITDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKMSGPPGDVANSLMDCYSKGTNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDISGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1615 861 MobiDBLite consensus disorder prediction 1 30 - -
Gso1g1615 861 ProSiteProfiles CXC domain profile. 598 697 IPR026489 -
Gso1g1615 861 SUPERFAMILY SET domain 586 832 IPR046341 -
Gso1g1615 861 SMART set_7 712 833 IPR001214 GO:0005515
Gso1g1615 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 861 IPR025778 GO:0031519
Gso1g1615 861 ProSiteProfiles SET domain profile. 712 827 IPR001214 GO:0005515
Gso1g1615 861 Coils Coil 195 215 - -
Gso1g1615 861 MobiDBLite consensus disorder prediction 835 861 - -
Gso1g1615 861 MobiDBLite consensus disorder prediction 835 854 - -
Gso1g1615 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 459 859 - -
Gso1g1615 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 459 - -
Gso1g1615 861 Gene3D SET domain 612 829 IPR046341 -
Gso1g1615 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 12 459 IPR045318 GO:0006338|GO:0018024
Gso1g1615 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 459 859 IPR045318 GO:0006338|GO:0018024
Gso1g1615 861 SMART CXC_2 646 683 IPR033467 -
Gso1g1615 861 MobiDBLite consensus disorder prediction 451 471 - -
Gso1g1615 861 Pfam SET domain 723 826 IPR001214 GO:0005515
Gso1g1615 861 MobiDBLite consensus disorder prediction 1 31 - -
Gso1g1615 861 CDD SET_EZH 712 828 - -
Gso1g1615 861 MobiDBLite consensus disorder prediction 349 427 - -
Gso1g1615 861 MobiDBLite consensus disorder prediction 447 478 - -
Gso1g1615 861 MobiDBLite consensus disorder prediction 377 404 - -
Gso1g1615 861 Pfam CXC domain 650 681 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1615 Gso-Chr1 52812815 52822711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1615 701 830 C2H2 Transcription Factor Family AT2G23740 27.211 9.74e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso1g1615 SET 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1615 - K11430 gmx:100799832 1709.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1615 1 52812815 52822711 Gso11g0466 11 4112216 4121818 GST