Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1606 ATGAGGGACTTGAAAACTTTAAAGGAATTGGTGGCAAGCGTTACAGATTGGAAGTCGCTTGAGAAGATGTCTTGCAAACCCTTTAAGCCTTCCATTTTGCATTTGGCAATATCACAAGATGCGCCCCACTTATATAGCGAAGAACAGTTGATTCAATTAAAGAATTTCAGCAAACTACTCTCGAGGGCTGAATCGAAGCCAAATACTAACAAGACTGACAAGAGGGTGGCCAAAAAAAGACAAATTGAGGAGAGACCTAAAGAGGAAAGAATCATGCCCGCAATGATTAAAAAACCAAGAAAAATAATCTTGGTACAGAACGAACCATCACCAGATTTGTCCAGAAGGATAGTCTTGGGACATAGTGGAACATCATCAGATTTGCCAAGAAGGATAATCTTGGAACATAGCGGACCATCACCAGATTTGCCTGTACAATTCAAGAATCGAGTCACTGAGTTGAGTGGTCATGATCTTAAATATTTGATGCACAAGAGACTCTTCTGTTCAGATGTGAGGCCGAACAACAATCGTCTCTCGATGCCCATGAATGAGATTATGTGTGAATTTCTCACACAAGAAGAGATTGAAAAATTGGATGAAAGAGATGGAAGCAATGGAAAAGGACGGCTGGTTGGTCTCGAAGTGACTGTGTTAGACCCATGTCTGAGAGAATTTAGTTTAGCATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTATAACCTCGTAACAAATTGGAATAGGATCGTATTTATCAATGAGTTCGAAGAAGGCCACGAGCTCCAAATTTGGTCTTTTAGGGTTGATAACAAGCTATATCTTCTACTAAACAAACTGTGA 843 0.4033 MRDLKTLKELVASVTDWKSLEKMSCKPFKPSILHLAISQDAPHLYSEEQLIQLKNFSKLLSRAESKPNTNKTDKRVAKKRQIEERPKEERIMPAMIKKPRKIILVQNEPSPDLSRRIVLGHSGTSSDLPRRIILEHSGPSPDLPVQFKNRVTELSGHDLKYLMHKRLFCSDVRPNNNRLSMPMNEIMCEFLTQEEIEKLDERDGSNGKGRLVGLEVTVLDPCLREFSLALKKWSMQRTDTYNLVTNWNRIVFINEFEEGHELQIWSFRVDNKLYLLLNKL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1606 280 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 278 IPR005508 GO:0003677
Gso1g1606 280 Gene3D - 153 279 IPR015300 -
Gso1g1606 280 SUPERFAMILY DNA-binding pseudobarrel domain 162 275 IPR015300 -
Gso1g1606 280 MobiDBLite consensus disorder prediction 67 86 - -
Gso1g1606 280 MobiDBLite consensus disorder prediction 62 86 - -
Gso1g1606 280 Pfam B3 domain-containing protein At2g31720-like 156 251 IPR005508 GO:0003677
Gso1g1606 280 PANTHER DUF313 DOMAIN PROTEIN 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1606 Gso-Chr1 52740018 52740952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1606 130 279 B3 DNA Binding Superfamily AT1G05930 25.000 4.60e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1606 - - gmx:102663703 560.066