Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1594 ATGGCCATCGACAGCGTTTATACTTCGTCTCCACCGTTTCAGAGCGGACCATCCGGCCACTCGCGCCATTTCTACCTTGCAGTCGACAGGCTCCACTTCAAAATGCAAACGGTGATTGAACTCGTGGATCTGGTGGCTCGACGTCCATGCTTGCCCATCGTGGTCTGCTGCAGCACGCGCGACGACCTCGACTCTCTCTGCTCCTCTCTCTCCACTCTCCCCTTCCTTTCCTCTTCTGCTCTGTACAGTGACCTTGGCGAAGATGAACGCTCTTTTATTTTAGAGAAATTCCGACAGGTGACGGCACGGTGGAACCAGACGAATCACGGTGGAGCACCGAATGAGGATGAGATTGGGAAAGATGAGAGATCTCACATGATCATTGTAACAGACGCTTGTCTTCCTCTCCTTGCTTCTGGAGAATTTCCTTTGAACGCTCATCTTCTCATTAACTATGAGTTACCAGCAAAGAAGGAGACATATGGAAGGCGTTTGGCAACTTGTTTAACAGCTGATGGAATTGTTATTAATATGGTTGTTGGTGGGGAAGTCGTAACTCTAAAAAGTATAGAAGAAAGCAGCAATATTGTCATGCAAGAAATGCCTATGCAAATTCTTGACATTTTATGA 630 0.473 MAIDSVYTSSPPFQSGPSGHSRHFYLAVDRLHFKMQTVIELVDLVARRPCLPIVVCCSTRDDLDSLCSSLSTLPFLSSSALYSDLGEDERSFILEKFRQVTARWNQTNHGGAPNEDEIGKDERSHMIIVTDACLPLLASGEFPLNAHLLINYELPAKKETYGRRLATCLTADGIVINMVVGGEVVTLKSIEESSNIVMQEMPMQILDIL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1594 209 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 3 206 - -
Gso1g1594 209 Gene3D - 19 209 IPR027417 -
Gso1g1594 209 PANTHER RNA HELICASE 3 206 - -
Gso1g1594 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1594 Gso-Chr1 52630670 52632970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1594 22 209 Eukaryotic Initiation Factors Gene Family AT3G19760 25.263 3.38e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1594 - K03257 gmx:100791017 392.504