Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1582 ATGGGTCTCTGCACTTCCAAACCCACTCTTTCCTCTCCTCAATCCGCCACACACTCCCCCGTGGCACCTTCTCAAAACGACGCCGTCACACTCACTCACAGTGCCGAACCTCACTCCAATGGCGAAAACCAAAACCCAAAGGAGCCTGAGAACAGCGGTAAGAGATCTCCGTTTTTCCCGTTCTACAGTCCGAGTCCGGGCCGCTACGTGTTCCCGGTCTCGCCGCGGCGCTTCTTCAAGCGCCCGTTTCCGCCGCCGTCGCCGGCCAAGCACATAAAGGCGGCGCTAGCGCGGCGGCACGGGTCGGTGAAGCCCAACGAGGCTGCCATACCGGAGGCCGAGGCGGTCGCCGGGCTCGACAAGAACTTCGGATTCTCCAAGCATTTCGGAAACAAATATGAACTTGGAGGTGAGGTTGGGAGAGGGCACTTTGGATACACTTGTGTTGCGAAGGTGAAGAAAGGGGAGCTGAAGGGACAACAAGTGGCCGTTAAAGTCATTCCAAAAGCCAAGATGACCACTGCAATTGCCATCGAGGATGTGAGAAGGGAAGTAAAAATATTGAGAGCTTTGACTGGACACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGAGAGTTGTTAGACAGAATATTATCAAGTGACTGGAAGAGGCAAAATTATGTCAACAACTATAAGATATCTCTTTGCTCTTTCAGAGGTGGGAAATACACAGAGGAAGATGCAAAAGCTGTCCTGAGACAAATACTGAATGTTGTTGCTTTTTGCCATTTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTTGCATCCAAGGAGGATACCTCAAAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACTAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTATGTGGCTCCCGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGCATTGGAGTGATTGCATATATTTTATTATGTGGTAGCCGTCCCTTTTGGGCCCGGACCGAATCTGGTATCTTTCGTGCGGTATTGAAAGCTGATCCAATTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACCAATTTTGTTAAGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCCGCAGCACAGGCATTAAGTCATCCATGGATTAGAAACAAGGATGTAAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGATGTTAACTGTTGATGAGCTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCACTATTAGCTTGGAAAATATCAAAGCGGTCTTGATGGTAAATGCAACAGATGCTATGAAGGAGTCACGCATACCTGACTTTTTGGCATCACTTAATGCATTACAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCCCTTAGTGTTCATCAACTTGAAACACTTGACCAGTGGGAGCAAAATGCACGTTGTGCCTATGACCTTTTTGAAAAGGATGGAAACAAGGCCATAGTCATAGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCACGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGGTCAATAG 1815 0.4573 MGLCTSKPTLSSPQSATHSPVAPSQNDAVTLTHSAEPHSNGENQNPKEPENSGKRSPFFPFYSPSPGRYVFPVSPRRFFKRPFPPPSPAKHIKAALARRHGSVKPNEAAIPEAEAVAGLDKNFGFSKHFGNKYELGGEVGRGHFGYTCVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSSDWKRQNYVNNYKISLCSFRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFASKEDTSKLKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPIFDEPPWPSLSDEATNFVKRLLNKDPRKRMSAAQALSHPWIRNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKMLTVDELFYLREQFALLEPSKNGTISLENIKAVLMVNATDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLETLDQWEQNARCAYDLFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKGQ* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1582 604 SMART serkin_6 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1582 604 Gene3D Phosphorylase Kinase; domain 1 126 226 - -
Gso1g1582 604 Gene3D - 431 522 - -
Gso1g1582 604 Gene3D - 438 592 - -
Gso1g1582 604 MobiDBLite consensus disorder prediction 1 58 - -
Gso1g1582 604 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gso1g1582 604 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 40 599 - -
Gso1g1582 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Gso1g1582 604 MobiDBLite consensus disorder prediction 1 51 - -
Gso1g1582 604 ProSiteProfiles Protein kinase domain profile. 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1582 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 599 - -
Gso1g1582 604 CDD STKc_CAMK 132 413 - -
Gso1g1582 604 SUPERFAMILY EF-hand 441 595 IPR011992 -
Gso1g1582 604 SUPERFAMILY Protein kinase-like (PK-like) 130 445 IPR011009 -
Gso1g1582 604 Pfam Protein kinase domain 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1582 604 Gene3D Transferase(Phosphotransferase) domain 1 243 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1582 Gso-Chr1 52481970 52487474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1582 1 604 EF-hand Containing Proteins AT3G50530 71.101 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso1g1582 Pkinase 3.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1582 K00924 - gmx:100794177 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1582 1 52481970 52487474 Gso11g0494 11 4405220 4410736 GST