Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1573 ATGGAAGATCTGTTCAGTGGAGGTGCTGTGGGAGCAGTGATGGGGGAGTTACTGAAAGGGGCTATTGCGACCATAAACAAAGGTCGAGACTTCAGACCCACCCTCGAGAGCAACATAGAAACCTTAAACTCTCTGGCTCCTCAAGTGGAGGAGATGAAGCGTTACAACAAGATGCTGGATCGCCCCATAGAGGAGATAGAGAGGTTGGAGTCTCAAATGCGAGCTGGCGAAGAGCTTGTTCGCAAGTGCTCCAAATTCGGTCGCTGGAGAATGCTCTCTTTCCCGTATTACCAGAGCAAGCTTCGGAGCAAGGACGAGGCTTTGAAGAGGCACTTTTCGGTGAACGTTTCGGCGGAGAACAAGAGGGACTTGATGGAGATCGTGGCCAGTGTGAGACAGATTCTGGATATTCTGTCCAAGAAGGAGGGTTTTGGGCATTCGTTCCATTTAAGGGGTCTAAGTGGGGCCCCCCAAGAACCGGAGTGTGTGGGAATGGATGTGCCTATGAGCAAGTTGAGGATTGACTTGCTCAAGGATGGTGTGTCCGTTCTTGTCTTGACTGGTTTGGGGGGATCGGGGAAAAGCACGTTGGCTAAGAAGATCTGTTGGGACCCTCAAGTCAAAGGCAAGTTTGGGGGAAACGTCTTCTTTGTCACCGTCTCAAAGACACCCAACTTGAAGAACATTGTAGAGACACTGTTTGAACACTGTGGTTGTCCGGTGCCTAAGTTTCAAAGCGATGAAGATGCAATCAATCGATTGGGATTTCTGCTGAGGCTTGTTGGGAAAAATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTAGCTCAGAAGCTCTTGTTGAGAAGTTTAAACTAGACATACCTGATTACAAGATTTTGGTGACTTCAAGGGTTTCATTTCCTAGATTTGGCACTCCATGCCAGTTGGATAAACTTGATCATGATCATGCGGTCGCCCTTTTCTGTCACTTTGCACAGCTGAATGGCAAGAGCTCATACATGCCTGATGAAAATCTTGTCCACGAGATTGTGAGAGGTTGTAAGGGTTCACCATTGGCGCTTAAGGTCACCGCAGGGTCACTCTGTCAGCAGCCTTATGAGGTGTGGCAAAATATGAAGGATTGTTTGCAAAGTCAATCCATTCTGCTGGAGTCTAGTAGTTCTGATTTGCTTTTTCGTCTTCAACAAAGTTTAGATATATTGGAGGATAAGTTCAAAATCAACGAAAAGGTGTGCTTCGAGGATCTGGGGCTATTTCCTGAAGATCAAAGGATCCCTGTTGCTGCCCTTATTGATATGTGGTCAGAACTGCATAACCTTGACGAAAATGGTAGGAATGCAATGACCATCGTCCATGATCTAACCATCAGGAATTTGATTAATGTCATAGTTACAAGGAAAGTAGCAAAGGATGCAGACATGTACTACAATAACCATTTCGTTATGCTGCATGATCTCCTTAGAGAGCTAGCAATCCGTCAAAGCGAAGAAAAACCATTTGAACAGAGAGAAAGACTGATTATTGACTTAAGTGGAGATAATCGTCCTGAATGGTGGGTAGGACAGAATCAGCAAGGAATCATTGGCCGTACTTTTTCATTCATCCTCGGAACGTCGTATAGACAGAAACAACTAAGGGTTGCTGCTCGCATATTATCTATTTCAACTGATGAAACGTTTACTTCAGATTGGTGTGACATGCTACCTGATGAAGCTGAGGTTCTAGTTTTAAATCTTAACTCTAGCCAGTACCCATTACCGAAGTTCACAGAAAATATGAGCAAACTTAAAGTTCTGATAGTCACAAATTATGGTTTCCATCGTTCAGAATTAAACAATTTTGAGCTACTTGGTTCTTTATCTAACTTGAAAAGAATCAGATTGGAAAAGGTTTCAGTCCCTTCCCTCTGCATATTGAAGAATCTGCGAAAATTGTCCCTTCATATGTGTAATACAAGGCAGGCTTTTGAAAACTGTTCTATCCAAATCTCAGATGCAATGCCAAATCTTGTGGAGATGAGCATTGACTATTGTAATGATCTGGTTAAATTGCCCGATGGGCTGAGTAACATCACCCCATTGAAGAAGCTTAGTATCACTAACTGTCACAGGCTATCTGCATTGCCACAAGATATTGCGAAGCTGGAGAATTTGGAAGTGCTAAGGCTATGTTCTTGCTCTGATTTGGTAGAGATGCCAGATTCTGTTAAAGGGCTTAACAAGCTAAGCTGTCTTGACATCTCAGATTGTGTAAGTCTGTCCAGATTACCAGATGACATTGGTGAGTTGAAGAAGCTTGAGAAGCTCTACTTGAAGGGTTGCTCAAAACTGAGTGAATTGCCGTACTCCGTCATTAATTTTGGAAATTTAAAGCATGAAATATATGTGATCTGTGACGAAGAAATGGCTGCCTTGTGGGAAAGTTTCCCTACCATTCCCAAGTTGAAGATAGAGATATCTTCAATGGAGATTAACTTAAATTGGCTTCCAGGAGTTCATTCCTGA 2508 0.4334 MEDLFSGGAVGAVMGELLKGAIATINKGRDFRPTLESNIETLNSLAPQVEEMKRYNKMLDRPIEEIERLESQMRAGEELVRKCSKFGRWRMLSFPYYQSKLRSKDEALKRHFSVNVSAENKRDLMEIVASVRQILDILSKKEGFGHSFHLRGLSGAPQEPECVGMDVPMSKLRIDLLKDGVSVLVLTGLGGSGKSTLAKKICWDPQVKGKFGGNVFFVTVSKTPNLKNIVETLFEHCGCPVPKFQSDEDAINRLGFLLRLVGKNPILLVLDDVWPSSEALVEKFKLDIPDYKILVTSRVSFPRFGTPCQLDKLDHDHAVALFCHFAQLNGKSSYMPDENLVHEIVRGCKGSPLALKVTAGSLCQQPYEVWQNMKDCLQSQSILLESSSSDLLFRLQQSLDILEDKFKINEKVCFEDLGLFPEDQRIPVAALIDMWSELHNLDENGRNAMTIVHDLTIRNLINVIVTRKVAKDADMYYNNHFVMLHDLLRELAIRQSEEKPFEQRERLIIDLSGDNRPEWWVGQNQQGIIGRTFSFILGTSYRQKQLRVAARILSISTDETFTSDWCDMLPDEAEVLVLNLNSSQYPLPKFTENMSKLKVLIVTNYGFHRSELNNFELLGSLSNLKRIRLEKVSVPSLCILKNLRKLSLHMCNTRQAFENCSIQISDAMPNLVEMSIDYCNDLVKLPDGLSNITPLKKLSITNCHRLSALPQDIAKLENLEVLRLCSCSDLVEMPDSVKGLNKLSCLDISDCVSLSRLPDDIGELKKLEKLYLKGCSKLSELPYSVINFGNLKHEIYVICDEEMAALWESFPTIPKLKIEISSMEINLNWLPGVHS* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1573 835 PRINTS Disease resistance protein signature 183 198 - -
Gso1g1573 835 PRINTS Disease resistance protein signature 260 274 - -
Gso1g1573 835 PRINTS Disease resistance protein signature 348 362 - -
Gso1g1573 835 PRINTS Disease resistance protein signature 714 730 - -
Gso1g1573 835 SUPERFAMILY L domain-like 560 792 - -
Gso1g1573 835 Gene3D - 395 495 IPR036388 -
Gso1g1573 835 Gene3D Ribonuclease Inhibitor 545 805 IPR032675 -
Gso1g1573 835 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 132 IPR008808 -
Gso1g1573 835 Gene3D - 153 301 IPR027417 -
Gso1g1573 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Gso1g1573 835 Gene3D - 312 390 IPR042197 -
Gso1g1573 835 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Gso1g1573 835 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 820 IPR039203 GO:0050832
Gso1g1573 835 Pfam NB-ARC domain 171 396 IPR002182 GO:0043531
Gso1g1573 835 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1573 Gso-Chr1 52382503 52387251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1573 188 781 WRKY Transcription Factor Family AT5G45050 23.758 1.42e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1573 - - gmx:100792590 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1573 1 52382503 52387251 Gso11g0505 11 4499205 4504151 GST
Gso1g1573 1 52382503 52387251 Gso5g0771 5 17382363 17387508 PCT
Gso1g1573 1 52382503 52387251 Gso17g1518 17 20243469 20248476 PCT
Gso5g0771 5 17382363 17387508 Gso1g1573 1 52382503 52387251 PCT
Gso17g1518 17 20243469 20248476 Gso1g1573 1 52382503 52387251 PCT