Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g1566 | ATGTTTATTCTTCGTCACCATACAAATCTCGCTATAGTCCTCACTATCTTCATAGCTTGCACAACAAGAGCACAAAACCTCACCACCTGCAATGGCAAATGCGGGGAGCACACCCTTCAGTTCCCTTTTGGCTTCTCCCAAGGTTGTCCAATCCAGCTTGACTGTTCCAACGACCAAGTCCAACTTCGCAGCGAATTCGGTGAATTTCTGGTCCAAAACGTAACAAACAGCAACATATTCGTAAATCTCCCTGCAAAATGCAACCGTACCATGGAATCAATTCAGCCAATTTTTACTGAGAATTTTGCCCCAACGATTAACAATAGCTTTCTGGTGCAAGATTGTAGAGAGGTGTTTGGTGGGTGTGTTATTCCTGCTAGTTTTGTGAGCAACCAAATTGATGTTGAGAACTGCAGCAACAAAAGTGCTAATATCAGTTGCTTTTCGAAACAAGATGAAGTTTTTGTGACGTACGCTGATTTGAACGGGACTAAGTGTAAGTACTTGTTCTCTGCGGTTTCTTTTGGGCAGAGCAAGGAGATTCCGCTGCAGTTTCAGGTTGTTGAGTTGGGGTGGTGGCTTCCTGGGCAGTGCGATGATCATCAATGTTCTAACAACGCTACCTGCACAACGGTCGACAGGGTTGGGTTCCGGTGCCAGTGTATCGAAGGTTTCACCGGAGACGGCTTCAAAAACGGCATCGGTTGCCGGAAAGCTTCGGCTTCAAGTTGCAGTGCTTCAACACTAACGTCCGGTGGATGTGGGAAAGCAACTAAAATCGGTGTTGTTGTTGGAGTAATCACCACTGGAGCTTTGGTGGTGGCTGGTCTGTTTCTTCTATGCTACTGTGCCAGGCGGCGTTCTACTTGGTTGAGAAAACATACCATGGTAAAGCGCCAATTACGCGAAGCTGCAGGCAACTCTAGTGTACCTTTCTATCCCTACAAAGAAATAGAAAAGGCGACAAATTTTTTCTCTGAGAAACACAGGCTTGGAACTGGGGCATTTGGTACAGTTTATGCTGGAAAACTGCACAATGATGAGTGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGATCAAGTCATGAATGAAATCAGGCTACTTTCTTCAGTGAGTCACCCGAATTTAGTTCGCCTCTTAGGTTGCTGCATAGAGAAGGGAGAGCATATCCTTGTTTATGAGTTTATGCAAAATGGAACACTTTCTCAGCACTTGCAAAGAGAGAGGAGTAAAGGACTACCGTGGACAATAAGACTTACCATTGCTACCGAAACTGCTAATGCTATAGCATATCTCCATTCTGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTACTAATATACTCTTGGATTATGGCTTCAAATCTAAAATAGCCGATTTTGGGCTTTCTAGGCTTGCATTGACAGAAACATCTCATATCTCAACCGCCCCACAAGGGACTCCAGGTTATGTCGATCCCCAATACCACCAGAACTTTCAGCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTGCTCGACCTCGAAGTGAGATTAATTTAGCTGCACTTGCTGTTGATAGGATTAGGAGAGGTGCTGTAGATGAGATCATAGACCCCTTCCTTGAACCACATAGAGATGCTTGGACACTGTATTCTATTCATAAAGTGGCCGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTAGCAGAAGAGCTAGAACACATTAGACGCAGTGGATGGGCATCTATGGAGGAAACTCTCACGGCTTCACCGATTGGGTCCACTAGTTCATCACCTCGTCATGGAAGTGAGAAGTCACTGGGTGGTATCAAAAAAGCTCGGCAAGGCCAAGGGAGTGAGAGATTGATTGTTCCGCAGAAGACGGAGAGCTTTTTGCAATCTATGGAGGTGAAGGACAGCTCCCCTGTATCAGTGCATGATCCAATTCCTTGGTCAAGTGGACACAGCTCACCTTCATCAAACAGCTTGTTGGGAAATGTCATCCCTTGA | 2085 | 0.4475 | MFILRHHTNLAIVLTIFIACTTRAQNLTTCNGKCGEHTLQFPFGFSQGCPIQLDCSNDQVQLRSEFGEFLVQNVTNSNIFVNLPAKCNRTMESIQPIFTENFAPTINNSFLVQDCREVFGGCVIPASFVSNQIDVENCSNKSANISCFSKQDEVFVTYADLNGTKCKYLFSAVSFGQSKEIPLQFQVVELGWWLPGQCDDHQCSNNATCTTVDRVGFRCQCIEGFTGDGFKNGIGCRKASASSCSASTLTSGGCGKATKIGVVVGVITTGALVVAGLFLLCYCARRRSTWLRKHTMVKRQLREAAGNSSVPFYPYKEIEKATNFFSEKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIRLLSSVSHPNLVRLLGCCIEKGEHILVYEFMQNGTLSQHLQRERSKGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSTNILLDYGFKSKIADFGLSRLALTETSHISTAPQGTPGYVDPQYHQNFQLSDKSDVYSFGVVLVEIITAMKVVDFARPRSEINLAALAVDRIRRGAVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWASMEETLTASPIGSTSSSPRHGSEKSLGGIKKARQGQGSERLIVPQKTESFLQSMEVKDSSPVSVHDPIPWSSGHSSPSSNSLLGNVIP* | 695 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g1566 | 694 | PANTHER | WALL ASSOCIATED KINASE-LIKE PROTEIN | 19 | 670 | - | - | |
Gso1g1566 | 694 | MobiDBLite | consensus disorder prediction | 613 | 694 | - | - | |
Gso1g1566 | 694 | ProSiteProfiles | Protein kinase domain profile. | 325 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g1566 | 694 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 445 | 457 | IPR008271 | GO:0004672|GO:0006468 | |
Gso1g1566 | 694 | MobiDBLite | consensus disorder prediction | 646 | 694 | - | - | |
Gso1g1566 | 694 | MobiDBLite | consensus disorder prediction | 613 | 628 | - | - | |
Gso1g1566 | 694 | Gene3D | Transferase(Phosphotransferase) domain 1 | 401 | 615 | - | - | |
Gso1g1566 | 694 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 19 | 670 | IPR045274 | GO:0007166 | |
Gso1g1566 | 694 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 598 | IPR011009 | - | |
Gso1g1566 | 694 | Gene3D | Laminin | 199 | 232 | - | - | |
Gso1g1566 | 694 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 400 | - | - | |
Gso1g1566 | 694 | Pfam | Protein tyrosine and serine/threonine kinase | 328 | 597 | IPR001245 | GO:0004672|GO:0006468 | |
Gso1g1566 | 694 | Pfam | EGF domain | 200 | 230 | IPR024731 | - | |
Gso1g1566 | 694 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | - | - | |
Gso1g1566 | 694 | ProSiteProfiles | EGF-like domain profile. | 194 | 231 | IPR000742 | - | |
Gso1g1566 | 694 | SMART | egf_5 | 197 | 237 | IPR000742 | - | |
Gso1g1566 | 694 | ProSitePatterns | Protein kinases ATP-binding region signature. | 331 | 354 | IPR017441 | GO:0005524 | |
Gso1g1566 | 694 | SMART | serkin_6 | 325 | 606 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g1566 | Gso-Chr1 | 52327802 | 52334143 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g1566 | 1 | 692 | Receptor kinase-like Gene Family | AT2G23450 | 56.259 | 0.0 | 760 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Gso1g1566 | PK_Tyr_Ser-Thr | 3.5e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g1566 | - | - | gmx:100779130 | 1381.31 |