Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1562 ATGGATGCTTTTCAGTTCAAAATTCTTATTTCAAGCATTCTTGCCCTGTTAGTGTGCGCCTTGTTTTATCAATTTAAGAGAACACTTTGTGGCAATACAAAGAAGATCTGTAGTGCACCTCAAGCAGCAGGTGCATGGCCTATCATTGGCCATTTGCACCTCTTCAATGGTCATCAACTCACACACAAAACACTTGGCATGATGGCTGAGAAACATGGTCCAATTTTCACAATAAAACTTGGTTCATACAAAGTTCTAGTATTGAGTAGTTGGGAGATGGCCAAAGAGTGTTTCACTGTCCATGACAAAGCATTCTCCACCAGACCATGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCGATGTTTGGCTTCACTCCATATGGTTCTTACTGGCGTCAGGTAAGGAAATTAACTACCATAGAACTTCTTTCTAACAATCGTCTTGAGCCACTCAAGGACACAAGAACGTTTGAGTTAGATGCTGCAGTAAAAGAGCTTTATAAGTTGTGGACAAGAAACGGTTGTCCAAAGGGAGGGGTTTTGGTGGATATGAAGCAGTGGTTTGGTGATTTGACGCATAATATTGCTCTCAGAATGGTGGGAGGGAAGTCTTATTGTGGGGTTGGTGATGATCATGCTGAAGGTGAGGCAAGAAGGTATAGGAGAGTTATGAGAGACTGGGTGTGCTTGTTTGGGGTGTTTGTGTGGTCTGATTCATTTCCATTTCTGGGGTGGTTGGATATCAATGGATATGAAAAGGATATGAAGAGAACTGCAAGTGAATTGGACACTCTAGTTGAAGGGTGGCTAGAGGAACACAAAAGGAAAAAGAAAAGAGGTTTGAGTGTGAATGGAAAGGAAGAACAAGATGATTTCATGGATGTCATGCTGAATGTTCTGCAGGGTACAGAGATTTCTGGTTATGATTCAGATACCATCATCAAAGCTACTTGCCTGAATTTGATTTTAGCAGGAACTGACCCCACCATGGTCACGCTAACATGGGCACTATCTCTGCTACTTAACCATCAAACAGAACTTAAAAGAGCCCAACATGAACTGGGCACTCTTATGGGCAAGCACAGGAAAGTAGACGAATCTGACATAAAGAAGTTAGTGTACCTCCAAGCCGTTGTGAAGGAAACTCTGCGCCTGTATCCACCAAGTCCAATTATCACCCTTCGTGCAGCCATGGAAGACTGCACCTTTTCATGTGGATATCACATTCCTGCAGGCACACAATTGATGGTGAATGCTTGGAAGATCCACAGGGATGGTCGTGTTTGGAGTGACCCTAATGATTTCAAGCCTGAAAGGTTTTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAGAACTATGAGCTCGTCCCTTTTAGTTCTGGAAGGCGAGCATGCCCTGGGGCATCACTCGCTCTGCGTGTGGTGCACTTGACCTTGGCTAGACTCTTACATTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACAGAGAGCTTCGGACTCACAAATTTAAAAGCAACCCCGCTTGAAGTTCTCCTAACTCCTCGTCAAGACACCAAATTTTATGAGGACTAG 1593 0.435 MDAFQFKILISSILALLVCALFYQFKRTLCGNTKKICSAPQAAGAWPIIGHLHLFNGHQLTHKTLGMMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMGYNYAMFGFTPYGSYWRQVRKLTTIELLSNNRLEPLKDTRTFELDAAVKELYKLWTRNGCPKGGVLVDMKQWFGDLTHNIALRMVGGKSYCGVGDDHAEGEARRYRRVMRDWVCLFGVFVWSDSFPFLGWLDINGYEKDMKRTASELDTLVEGWLEEHKRKKKRGLSVNGKEEQDDFMDVMLNVLQGTEISGYDSDTIIKATCLNLILAGTDPTMVTLTWALSLLLNHQTELKRAQHELGTLMGKHRKVDESDIKKLVYLQAVVKETLRLYPPSPIITLRAAMEDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWSDPNDFKPERFLTSHKDVDVKGQNYELVPFSSGRRACPGASLALRVVHLTLARLLHSFNVASPSNQVVDMTESFGLTNLKATPLEVLLTPRQDTKFYED* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1562 530 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 Gene3D Cytochrome P450 32 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PANTHER CYTOCHROME P450 82C3-RELATED 1 528 - -
Gso1g1562 530 PANTHER CYTOCHROME P450 CYP82D47-LIKE 1 528 - -
Gso1g1562 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gso1g1562 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 SUPERFAMILY Cytochrome P450 45 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1562 530 Pfam Cytochrome P450 41 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1562 Gso-Chr1 52294510 52297115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1562 1 528 Cytochrome P450 AT4G31940 49.813 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1562 - - gmx:100792065 1088.94