Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1561 ATGGTCATGGTCATGGATGTTTTCCAGCTCCAAACACTCGTTTCAGGCATTCTTGCCTTGTTAGTAGGTGCCTTGCTTTATAAGTTAAAGAAAACACATGGTCCTAATGCAAAGATCTGCACTGCGCCACAAGCAGGAGGAGCATGGCCTATTGTTGGTCATTTGCACCTCTTCGGGGCTCATCAACTTACACACAAAACACTAGGGACGATGGCTGACAAACATGGGCCAATTTTCACGATAAAACTTGGTTCATACAAAGTTCTGGTGTTGAGTAGCTGGGAGATGGCCGAAGAGTGTTTCACTGTCCATGACAAAGCATTCTCCACCAGGCCCTGTGTTGCAGCCTCAAAGCTAATGACCTACAACTCTGCAATGTTTGGCTTCGCGCCTCATGGACCGTACTGGCGTGAGATGAGGAAATTTGCCACTATTGAACTTCTCTCTAACCAAAGGCTTGAACTTCTCAAGGACACAAGAACATCTGAGTTAGAGGCTGCAACAACAAAGGCTTACAAGTTATGGTCAAGAGAAGGTTGTCCAAAGGGAGGGGTTTTGGTAGATATGAAGCAGTGGTTTGGTGATTTGACGCATAATATTATTCTGAGAATGGTGGGAGGGAAGCCATATTATGGGGCTGGTGATGATTATGCAGAAGGTGAAGCCAGAAGGTATAAGAAAACTATGAGGGACTTTATGAGATTGTTTGGGGTGTTTGTGTTATCTGATGCAATTCCGTTTCTGGGGTGGATAGACAACAATGGATACAAAAAGGCTATGAAGAAAACAGCTAGTGAAATAGACACTTTGGTTGCAGGGTGGCTGGAGGAACACAAAAGAAAAAGAGCTACGAGTACAAATGGAAAGGAAGAACAGGATGTCATGGGTGTTATGCTGAATGTTCTGCAGGATCTTAAGGTTTCTGGTTATGATTCAGACACCATCATCAAGGCTACTTGCCTGAATCTGATTTTGGCAGGAGGAGACAGCATCATGGTGGCTCTAACATGGGCGCTATCTCTGCTACTAAACAATGAAATTGAACTTAAAAAAGCTCAAGATGAATTGGACACTCAAATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAAGTTAGCGTACCTCCAAGCCATCGTGAAGGAAACTATGCGCCTGTATCCACCAAGTCCTGTAATCACCCTTCGTGCAGCCATGGAAGAGTGCACATTTTCATGTGGCTATCACATTCCAGCCGGCACGCATTTAATCGTGAATACTTGGAAGATCCATAGAGATGGTTGTGTATGGCCTGATCCTCATGATTTCAAGCCTGAAAGGTTCTTAACAAGCCACAAAGATGTAGATGTAAAGGGTCAGAACTATGAGCTCATCCCTTTTGGTTCTGGAAGGAGAGTATGCCCCGGTTCCTCACTGGCTCTGCGTGTCGTGCACATGGCCTTGGCTAGACTCTTACACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGCTGTGGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCTACTCCACTTGAAGTTCTCCTAACTCCACGTTTAGATACAAAGCTTTATGAGAACTAA 1593 0.4432 MVMVMDVFQLQTLVSGILALLVGALLYKLKKTHGPNAKICTAPQAGGAWPIVGHLHLFGAHQLTHKTLGTMADKHGPIFTIKLGSYKVLVLSSWEMAEECFTVHDKAFSTRPCVAASKLMTYNSAMFGFAPHGPYWREMRKFATIELLSNQRLELLKDTRTSELEAATTKAYKLWSREGCPKGGVLVDMKQWFGDLTHNIILRMVGGKPYYGAGDDYAEGEARRYKKTMRDFMRLFGVFVLSDAIPFLGWIDNNGYKKAMKKTASEIDTLVAGWLEEHKRKRATSTNGKEEQDVMGVMLNVLQDLKVSGYDSDTIIKATCLNLILAGGDSIMVALTWALSLLLNNEIELKKAQDELDTQIGKDRKVEESDIKKLAYLQAIVKETMRLYPPSPVITLRAAMEECTFSCGYHIPAGTHLIVNTWKIHRDGCVWPDPHDFKPERFLTSHKDVDVKGQNYELIPFGSGRRVCPGSSLALRVVHMALARLLHSFNVASPSNQAVDMTESIGLTNLKATPLEVLLTPRLDTKLYEN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1561 530 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PANTHER CYTOCHROME P450 82C3-RELATED 5 528 - -
Gso1g1561 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gso1g1561 530 Gene3D Cytochrome P450 39 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1561 530 PANTHER CYTOCHROME P450 CYP82D47-LIKE 5 528 - -
Gso1g1561 530 SUPERFAMILY Cytochrome P450 48 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1561 Gso-Chr1 52280270 52282352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1561 42 528 Cytochrome P450 AT4G31940 52.227 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1561 - - gmx:106794123 1057.36