Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1558 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAACAGCAGCAGCAGTCTCCTTTTCAGCCACAGCAAACTAGTTTGTTCCTTCCGCAGCAGCAGCAGCAGCAACAACAACAGCAACAATTTCAACAACAGCAACAACAGCAGCAGCCGCAACAACAGTTGTTTTTGTTTACTAACGATAGAACTCCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTAGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGATTTGAGCTTGATGCAGGTCATATTGTTCAGGAACTTGGTGGAATTAACACAGCTATGGAACGACAGAAAACATTGCTACAGGAACTGATGTCCACTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCTAGGTTCCTTCATCCCAGTGGGGGTACATCAAGTGCCACTGCCCCATCACAGACTCCTGGTGCAACTATAGCACCTAGTTCGAATAGCCAACCTACAACTGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCGTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAGTGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTGGACTCTGAGAGAAATGCATCCGCTAATGGTTCCTCATTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCACGACTTTTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGTCGACGGGGGGAGGTGAATGATCCATTTTTGGAGGCAGATCGACGAGAAACTGCAAGACAAGAAGCCGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGACTGCCCCACAGACATCTGCAGCAACTTCATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAGCACACCATCTTCTGCTCCATCGTCTTCTATGTTGTCATCTTTGTTTACAACACCAACTCCTGCTCCTGGACCTCAAACCTCACTTTTTGGTTCTACATCTGTACCTGGTTCTGCATCAACTCCCTCTCTGTTTGGTAATACTACTCCATTGTTTAGTACAACTCCAGCTACAAATTCACTCTTTTCAAGTCCATTTGTTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGAACGAAAAATCAACGGGTGAAATCTAGAACCGCTCGACGCTAA 1413 0.4515 MSFSLFATPQQQQQQSPFQPQQTSLFLPQQQQQQQQQQQFQQQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGINTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSGGTSSATAPSQTPGATIAPSSNSQPTTASIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLDSERNASANGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQAALTAPQTSAATSSLSSGSGFSLFSTPSSAPSSSMLSSLFTTPTPAPGPQTSLFGSTSVPGSASTPSLFGNTTPLFSTTPATNSLFSSPFVSGAATGSGASFGPGTKNQRVKSRTARR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1558 470 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 442 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Gso1g1558 470 MobiDBLite consensus disorder prediction 306 325 - -
Gso1g1558 470 Gene3D - 213 303 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 447 470 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 330 344 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 386 418 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 306 344 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 170 195 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 447 462 - -
Gso1g1558 470 MobiDBLite consensus disorder prediction 1 44 - -
Gso1g1558 470 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1558 Gso-Chr1 52261116 52266269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1558 13 470 NAC Transcription Factor Family AT4G37130 59.412 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1558 K14307 - gmx:100776992 761.525