Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1543 ATGGAATATTCTCCACTGTCCATTGTTATTACCTTCTTTGTGTTCTTGCTTTTGCATTGGCTAGTTAAAATTTACAAGCAAAAATCGAGATACAAATTGCCCCCTAGCCCATGGAGGTTACCTATCATTGGTAACCTCCATCAGCTAGCATTAGCAGCTTCACTTCCTGATCAAGCTCTCCAAAAACTTGTTCGCAAATATGGGCCTCTCATGCACCTCCAACTTGGTGAAATTTCAACCCTGGTTGTGTCCTCCCCCAAGATGGCCATGGAGGTGATGAAAACCCATGATGTTCATTTTGTGCAGAGGCCCCAACTTCTGGCTCCTCAATTTATGGTATATGGAGCAACAGATATTGTTTTCGCTCCATACGGTGATTATTGGAGGCAAATCAGGAAAATATGTACCTTAGAGCTTCTAAGTGCCAAGAGGGTCCAATCTTTCTCTCATATCAGACAAGATGAGAACAGAAAACTCATACAATCAATTCACTCATCCGCAGGCTCATCAATCGATCTTAGTGGCAAACTTTTCTCTTTGTTGGGCACCACTGTTTCTAGGGCAGCGTTTGGAAAAGAAAATGATGACCAAGATGAATTAATGTCTTTGGTCAGAAAAGCTATAACAATGACAGGAGGATTTGAATTGGATGACATGTTTCCTTCATTGAAACCATTGCATTTACTGACCCGACAGAAAGCCAAAGTGGAGCATGTTCACCAGCGGGCAGACAAAATCTTAGAAGACATTCTCAGAAAGCATATGGAAAAACGAACAATAGGAAAAGAAGGCAGTAATGAAGCAGAGCAAGAAGATCTTGTTGATGTTCTTTTGAGACTCAAAGAAAGTGGCAGTCTCGAGGTTCCAATGACTATGGAGAATATCAAAGCTGTGATATGGAACATATTTGCTTCTGGAACTGATACCCCGGCATCAACATTGGAGTGGGCAATGTCAGAAATGATGAAAAATCCAAGAGTGAGGGAGAAGGCACAAGCTGAATTAAGACAAACATTCAAAGGAAAGGAAATAATACGTGAAACTGATCTAGAAGAACTTAGTTACCTGAAGTCAGTGATCAAAGAAACGTTGAGGTTACACCCTCCTTCTCAGTTGATCCCTAGAGAGTGCATCAAATCAACCAACATTGATGGGTACGATATACCAATAAAGACTAAAGTCATGATAAACACATGGGCAATTGGAAGAGATCCTCAATATTGGAGTGATGCTGAAAGGTTTATCCCAGAGAGATTTGATGATAGTTCTATCGATTTCAAAGGGAATAGCTTTGAGTATATACCCTTTGGGGCAGGAAGGAGAATGTGTCCAGGCATTACATTTGGTTTGGCTAGCATTACGCTTCCATTGGCTTTAATACTCTATCACTTTAATTGGGAACTCCCAAATAAGATGAAACCTGCGGATTTGGATATGGATGAACTCTTCGGACTGACAGTTGTAAGGAAAAACAAGTTGTTTTTGATTCCCACTATTTATGAAGCTTCATGA 1512 0.4054 MEYSPLSIVITFFVFLLLHWLVKIYKQKSRYKLPPSPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEVMKTHDVHFVQRPQLLAPQFMVYGATDIVFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENRKLIQSIHSSAGSSIDLSGKLFSLLGTTVSRAAFGKENDDQDELMSLVRKAITMTGGFELDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTIGKEGSNEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFASGTDTPASTLEWAMSEMMKNPRVREKAQAELRQTFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLIPRECIKSTNIDGYDIPIKTKVMINTWAIGRDPQYWSDAERFIPERFDDSSIDFKGNSFEYIPFGAGRRMCPGITFGLASITLPLALILYHFNWELPNKMKPADLDMDELFGLTVVRKNKLFLIPTIYEAS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1543 503 Gene3D Cytochrome P450 25 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 SUPERFAMILY Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 PANTHER OS08G0105600 PROTEIN 2 502 - -
Gso1g1543 503 PANTHER CYTOCHROME P450 71D8 2 502 - -
Gso1g1543 503 Pfam Cytochrome P450 34 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1543 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1543 Gso-Chr1 52082854 52085039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1543 21 500 Cytochrome P450 AT3G26300 43.813 6.47e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1543 - K15472 gmx:100817439 1000.73