Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1542 ATGGAAGCTCAAACCTACTTCTTGGTTATTGCCTTATCCCTCTTCATTCTACTGAATTGGCTTGCAAAATATCTCAAGCTAAAACCTAATGTTGCTCACAAACTTCCCCCTGGTCCAAAAAAGCTACCTCTCATAGGAAACATGCATCAACTAGCAGTAGCAGGTTCACTCCCACATCGTGCACTTCAAAAACTTGCTCATATATATGGACCTCTCATGCACCTCCAACTTGGTGAGATTTCTGCAGTGGTTGTATCCTCCCCCAACATGGCCAAGGAAATAACCAAAACCCATGATGTTGCTTTTGTGCAGAGACCACAAATCATTTCTGCACAAATCTTGTCTTACGGGGGATTAGATGTTGTTTTTGCTCCATATGGCGATTACTGGAGACAAATGAGGAAGGTGTTCGTGTCAGAACTTCTCAGTGCCAAGAGGGTTCAGTCTTTCTCTTTTATTAGAGAAGACGAGACAGCAAAATTTATAGACTCGATTCGAGCATCGGAAGGTTCACCAATCAATCTCACTAGAAAAGTTTTCTCACTGGTAAGTGCTTCTGTTTCCAGGGCAGCAATTGGTAACAAATCTAAGGACCAGGATGAGTTTATGTATTGGCTTCAGAAAGTAATAGGATCGGTTGGAGGATTCGACCTTGCTGATTTGTTTCCTTCAATGAAATCCATACATTTCATAACTGGGTCGAAGGCCAAATTGGAGAAGCTGCTGAATAGGGTTGACAAGGTGTTGGAAAACATTGTCAGAGAGCATCTAGAAAGGCAAATAAGAGCAAAAGATGGCAGAGTTGAAGTAGAGGACGAAGATCTTGTTGATGTTCTTCTCAGAATCCAACAAGCTGACACTCTCGACATCAAAATGACGACTAGGCACGTCAAAGCTTTGATATTGGATGTATTTGCTGCTGGAATCGATACGTCAGCATCAACACTAGAGTGGGCAATGACAGAAATGATGAAAAATTCAAGAGTAAGGGAAAAAGCACAAGCTGAACTAAGAAAAGTATTTGGAGAGAAGAAAATAATTCATGAAAGTGATATAGAGCAGCTTACTTATTTGAAGTTGGTGATCAAAGAGACATTAAGACTACACCCACCTACTCCTTTATTGATCCCTAGAGAATGCTCTGAAGAAACCATCATTGGTGGTTATGAAATACCTGTCAAAACTAAAGTGATGATAAATGTATGGGCAATTTGCAGGGATCCCAAATATTGGACTGATGCAGAAAGGTTTGTCCCAGAAAGGTTCGAGGATAGTTCTATTGATTTCAAAGGGAATAACTTTGAGTATCTTCCATTTGGGGCAGGAAGGAGAATTTGTCCAGGCATCACATTTGGTTTAGCAAGTATTATGCTTCCATTGGCTCAATTACTTTTGCATTTCAACTGGGAGCTCCCAGATGGGATGAAACCTGAAAGTATAGATATGACAGAACGCTTCGGATTGGCTATTGGGAGGAAACATGATTTGTGTTTAATTCCCTTTGTTGATAATCTTTGA 1518 0.4051 MEAQTYFLVIALSLFILLNWLAKYLKLKPNVAHKLPPGPKKLPLIGNMHQLAVAGSLPHRALQKLAHIYGPLMHLQLGEISAVVVSSPNMAKEITKTHDVAFVQRPQIISAQILSYGGLDVVFAPYGDYWRQMRKVFVSELLSAKRVQSFSFIREDETAKFIDSIRASEGSPINLTRKVFSLVSASVSRAAIGNKSKDQDEFMYWLQKVIGSVGGFDLADLFPSMKSIHFITGSKAKLEKLLNRVDKVLENIVREHLERQIRAKDGRVEVEDEDLVDVLLRIQQADTLDIKMTTRHVKALILDVFAAGIDTSASTLEWAMTEMMKNSRVREKAQAELRKVFGEKKIIHESDIEQLTYLKLVIKETLRLHPPTPLLIPRECSEETIIGGYEIPVKTKVMINVWAICRDPKYWTDAERFVPERFEDSSIDFKGNNFEYLPFGAGRRICPGITFGLASIMLPLAQLLLHFNWELPDGMKPESIDMTERFGLAIGRKHDLCLIPFVDNL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1542 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PANTHER CYTOCHROME P450 71D8 3 504 - -
Gso1g1542 505 PANTHER OS08G0105600 PROTEIN 3 504 - -
Gso1g1542 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gso1g1542 505 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1542 505 Coils Coil 231 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1542 Gso-Chr1 52073289 52076455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1542 12 500 Cytochrome P450 AT3G26310 42.972 2.35e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1542 - K23806 gmx:100785715 978.778