Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1537 ATGTACAAAAAGTGGTGCATAATTGCATTCATTTCTCTGCAAACAACAATGGATCTCTTTCCCTTCATCCCCATCATCATTTTCACACTATTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTACATTGGTTTAGGCACAGTAGCGTGCCCAAGAAGGGGTAACAAAAATTCTATCCGTGGTTACACTTGCAATGGTGCAAACCATAGCTGCCAAAGTTACCTCACCTTCAGATCTCAACCCATCTACAACTCTGTCAAGACAATATCAACTTTGTTGGGTTCTGACCCATCCCAGCTTGCTAAAATAAACTCAGTTTCCATGAATGACACCTTTGAAACAAACAAGTTGGTTATTGTTCCGGTCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGAGTTCCATAATTCAGAAACTTACTTCTTGATTGCCAACAATACTTTTGAGGGCCTCACAACATGCCAAGCTTTGGAGAACCAAAACCACAACCCTGCAAACATATACCCTGGTAGAAGGCTTTTAGTGCCTCTTAGATGTGCTTGTCCCACAAAGAATCAAACTGAGAAAGGCATCAGGTACCTCCTAAGTTACTTGGTAAACTGGGGTGATTCTGTTTCATTCATTAGTGAGAAATTTGGTGTCAACTTTATGACCACTCTTGAAGCTAATACACTTACTCTCACCCAAGCCACGATCTATCCCTTTACCACAATTCTAGTTCCCCTTCATGACAAGCCCTCAAGTTCTCAAACTGTTTCGCCAACTCAGCGCACTCCACCACCCTCTCCTCCCTCTTCTGATCATAGCTCAAACAAAACATGGGTGTATGTAGTTGTTGGGGTTGTTGTGGGAGCTATTGCCTTAATATCGGTTCTCTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAGAAAGAAAGATGACTCAGTGGTAGTAGGGTCCAAGAGTTTTGAGGCAATTGAGGAAAAACCAGAAGTGAAAGTGAATGAAAAATTGTCAGAGATCATATCTGGCATAGCTCAGTCTTTCAAAGTGTATAATTTTGAGGAACTACAGCGTGCAACAGATAACTTTAGTCCTAGCAGCTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAACGGTGATTTGGCTGCAATTAAAAGGATAGAAGGAGATGTGTCAAAAGAGATAGAGATACTGAACAAAATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGGGTTGGTACCTTGTTTATGAGTATGCCGCTAATGGGGACTTGAGTGAATGGATCTACTTCCACAACGTGAATGGGAAATTTCTGAGTTGGACGCAGAGAATGCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCATATCCACAAGGATATAAACAGCAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTCACGAATTTAAGCCTTGCTAGGTGTTTGGAAGGAGGGGACGATCAACTTCCCGCGACGAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCTACAAAGCTTGATGTGTATGCATTTGGGGTACTTATGCTGGAAATGGTCACTGGAAAAGAGGTTGCTGCTATTTTAACTGAAGATGAGACAAAATTGTCACATGTTTTAAGTGGCATACTTGGTGAGGAAAGTGGCAAGGAGATGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAAAATTGTCCATTGGAACTTGCTATGTTTGTGATTGAAATGATTGATAATTGCATAAAGACAGATCCGGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTATGTCAAGAACCCTGAAGTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAATTAA 1950 0.4246 MYKKWCIIAFISLQTTMDLFPFIPIIIFTLLIHNFSLILGQQPYIGLGTVACPRRGNKNSIRGYTCNGANHSCQSYLTFRSQPIYNSVKTISTLLGSDPSQLAKINSVSMNDTFETNKLVIVPVNCSCAGEYYQTNTSYEFHNSETYFLIANNTFEGLTTCQALENQNHNPANIYPGRRLLVPLRCACPTKNQTEKGIRYLLSYLVNWGDSVSFISEKFGVNFMTTLEANTLTLTQATIYPFTTILVPLHDKPSSSQTVSPTQRTPPPSPPSSDHSSNKTWVYVVVGVVVGAIALISVLCAVIFFTRYRKNRKKDDSVVVGSKSFEAIEEKPEVKVNEKLSEIISGIAQSFKVYNFEELQRATDNFSPSSWIKGSVYRGVINGDLAAIKRIEGDVSKEIEILNKINHSNVIRLSGVSFHEGGWYLVYEYAANGDLSEWIYFHNVNGKFLSWTQRMQIALDVATGLDYLHSFTSPPHIHKDINSSNILLDGDFRGKVTNLSLARCLEGGDDQLPATRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILTEDETKLSHVLSGILGEESGKEMLKEFVDPSLGENCPLELAMFVIEMIDNCIKTDPASRPSVHEIVQSMSRTLKSSLSWERSMNVPRN* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1537 649 Gene3D Transferase(Phosphotransferase) domain 1 430 643 - -
Gso1g1537 649 MobiDBLite consensus disorder prediction 253 277 - -
Gso1g1537 649 Pfam Protein kinase domain 382 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1537 649 SUPERFAMILY Protein kinase-like (PK-like) 348 629 IPR011009 -
Gso1g1537 649 Gene3D Phosphorylase Kinase; domain 1 336 429 - -
Gso1g1537 649 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 25 645 - -
Gso1g1537 649 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 645 - -
Gso1g1537 649 Pfam LysM domain 204 248 IPR018392 -
Gso1g1537 649 ProSiteProfiles Protein kinase domain profile. 314 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1537 649 ProSiteProfiles LysM domain profile. 202 247 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1537 Gso-Chr1 52039119 52041563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1537 25 643 Receptor kinase-like Gene Family AT2G23770 43.582 1.83e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso1g1537 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1537 - - gmx:100815842 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1537 1 52039119 52041563 Gso11g0538 11 4829633 4831887 GST