Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1523 ATGGAAACAGGCAGTTTTTCTGAGCTGATCTGGATGGGAACTGATGAAGAAAGCACAGCTAAAGTTTCTAAACCATCTTCTACTTCTTCTACTCAGATACCACTGGCACCTTCATATCCTGATTGGTCAAGCTCGGTGCAGGCTTACTATGCTCCTGGAGTCACACCACGTGCATTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCTTATTTGTGGGGAAGCCAGCCTCTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGGAATGTCTATGCTCATCCAAGCATGGCAACGACCCCAAGCACCACACAGAATGGTACAGAGTTATTAGGAAAGGAGTCTGATGGAAAAGATCGGGTTTCTGCCAAAAGTTCGAAGGGTGTGTCTACAAACAGTGGTTCCAAAGCAGGAGACAATGGAAAGGCAGGCTCAGGTTCTGGAAATGATGGTGTCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCTTCAGATGCTAGTGATGAGAATACTGACCAACAGGAATCAGCTACAAACAAGAAAGGGAGTTTTGACCAAATGCTTGTTGATGGAGCCAATGCACGGAAGAATTCTGTGAGCACCATTCCTCATTCTTCAGTACCTGGAAATCCCGCTGTCTCAATGTCTCCAACTAGTCTTAATATTGGAATGGACTTGTGGGACGCATCTCCTGCTGGTGCCGAAGCTGCAAAAATGAGACATAATCAGTCTTCTGCCTCAGAAGCTGTTACTCCTCCAACCATAATGGGACGTGAAGTCCCGCTTGGTGAACAATGGATACAAGACGATCGTGAACTAAAGAAACAGAAAAGGAAACAGTCTAATAGGGAGTCTGCTAGGAGGTCAAGGCTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCTCTGAGAAGTGAGAATCGAATTCTCAGAGAAGAGCTTCAGAGAGTATCTGAAGAATGCAAGAAACTTACATCTGAAAATGATTCCATCAAGGAAGAGTTAGAACGAATGTGTGGTTCAGAAGCAATTGCTAATCTTGAATGA 1080 0.4509 METGSFSELIWMGTDEESTAKVSKPSSTSSTQIPLAPSYPDWSSSVQAYYAPGVTPRAFFASTVASPTPHPYLWGSQPLIPPYGTPVPYPAIYPPGNVYAHPSMATTPSTTQNGTELLGKESDGKDRVSAKSSKGVSTNSGSKAGDNGKAGSGSGNDGVSQSAESGSEGSSDASDENTDQQESATNKKGSFDQMLVDGANARKNSVSTIPHSSVPGNPAVSMSPTSLNIGMDLWDASPAGAEAAKMRHNQSSASEAVTPPTIMGREVPLGEQWIQDDRELKKQKRKQSNRESARRSRLRKQAECEELQKRVESLRSENRILREELQRVSEECKKLTSENDSIKEELERMCGSEAIANLE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1523 359 Pfam bZIP transcription factor 278 339 IPR004827 GO:0003700|GO:0006355
Gso1g1523 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Gso1g1523 359 MobiDBLite consensus disorder prediction 19 37 - -
Gso1g1523 359 MobiDBLite consensus disorder prediction 16 37 - -
Gso1g1523 359 SUPERFAMILY Leucine zipper domain 280 336 IPR046347 GO:0003700|GO:0006355
Gso1g1523 359 MobiDBLite consensus disorder prediction 271 286 - -
Gso1g1523 359 MobiDBLite consensus disorder prediction 200 230 - -
Gso1g1523 359 Gene3D - 280 334 - -
Gso1g1523 359 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Gso1g1523 359 Pfam G-box binding protein MFMR 12 104 IPR012900 -
Gso1g1523 359 MobiDBLite consensus disorder prediction 103 306 - -
Gso1g1523 359 PANTHER G-BOX-BINDING FACTOR 1 12 359 - -
Gso1g1523 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Gso1g1523 359 Coils Coil 290 345 - -
Gso1g1523 359 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 359 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso1g1523 359 MobiDBLite consensus disorder prediction 131 190 - -
Gso1g1523 359 CDD bZIP_plant_GBF1 282 332 IPR045314 GO:0003700|GO:0006355
Gso1g1523 359 MobiDBLite consensus disorder prediction 103 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1523 Gso-Chr1 51906011 51913230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1523 12 359 bZIP Transcription Factor Family AT4G36730 51.714 9.14e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso1g1523 MFMR 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1523 K09060 - gmx:100808533 677.552