Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1480 ATGGATCAGTCATCACCTTATTATAACCGATTTCCTCAGACTCCAAGCTCAACCAAAAAGGGAAGAAGTGGTTATGAACCATCAGACACAGAGACAGAGCGGCAAGAGATTCCACGGCATGAACGAGAAAGAAGAAACTTCACTTTAGAAGAAACAAAAGATTTTACTCTAATGAACAAAAGCCCCATGGCACTACACAGGAGGCACCCTTCAAGGTTTGAAAACGAAGTCTCATCAGCTTCAACAGCTTCAGCTCCACGAAGAAGACACCATAGTAAATCACCCTATAAGCTGCGCGTAGCAGAAGCAGATGTTGCTGTTGCTGTTGCTGGTGTTGCATCATCATCACCCATAATAGGTTTGAATACAAGGAGAAATATCAGTCCCTTGTCGAGACCTGACATTGGAAGAACCGTGTCTCCTTTCAGGGAGCAAAGAATTGAGAAGCCACACTACAAGAGATCAGTGACTGCTCCAAGATTGAGGATTCAAGAGAGCAACAACGGAGGGAGAACCAATGAAATGGTTAATAGACAAAGAGAAGCTTCTCCTTTCAAAGCTCCTTCGGTTGGAGAAATCAACGAGATGATAGCACAGGTGAAGCTATCTCAAGATCCCACCAGTGATTATTCGTCAGTGCTTGAAAGCACTGATTCCATTCATCCGGGTGACCTTTTCTTTTCTCGCGAATGCAATGCCTTTCAAGCGAAGAATTCTTCGTTGCCAAGACGCATCGAACAACGTGAGCATTTCAGTCCAAGGCCACCGGTGAACACCACGAGAGTCCCATCTGAAAGAAAAGGAAAGAATGCTGACATTAAGATGAATATGAATATCTTGTCTCGATCAACCACGGTTTTAAGTACTTCGGCTACGAGCAGAAAGGGCAGTGGCACTGGGAAGCCAAGTAGTGTAACAAGCGAAAGTAGTGGAAAGACAACTGAAAGCATGAGGAAATTCACAGTCAACAGAAAAAAGAATCAGAAAGATACATGGTTTTCTTGCATGAGAACAGGTAACTGTAGAACCACTAGAAAATCGCCTGAACGTCGACCAATTGATGAATCTTCTTTCATAGAGAGGGCAGTGGTAGTCGAAAGCCTCCCACAATTCTGGGCAGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAGACAAGAAGCTCAACTTCTCAAGGAATTGGTGTCTCAGGGCTCTTGTCCTCATATTTTGCTTCAAGGACCCTCTGGCTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGGGATGCATGTTGTAACCTGTCTCATGATTTAAGACATTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTCGATGTAAATTCAGAATCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCAGTTGCCCCCGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTTATAGTTCTTTATGACGTCCACAAAGCAGTAGATAATATCCGGCACATTATCAAATGGATCATAGACCGCTATTCGGATATTTGCAAATTAGTGCTCTGCTGTGAAGATGATGCAGACATTATTGAACATGTGAAAAATCGATTCAAAGTTATCCAAGTTGATGCTCCTCAAAATCACGAAATTATTGAGGTTCTTATTCAGATAGCAAAGAATGAGGAAATTGATCTATCCATGAATTTTGCTGCAAAAATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCTGCAGAACAACCAATTCCGGTTGGATGGGAGGAGATTGTAATAGAAGTTGCCGCAGAGATCCTAGCTGATCCATCATTTTCACGCTTACTCTCAATACGAGGGAAATTTCAAATGCTTCTCTTGGATTTTGTCCACCCGAAATTGATTCTCCAGAAACTCGTGGGACATCTCCTAAAAAGAATTGAGGTCAGCTTAAGAAGGGAGCTTTACTACTGGCATGCTTATTATGACAGAAGACTCCCCCCAGGAATAACTGCTTTACTAAAGTTAGAAGAATTCGTGGCCAAGTTCATGAGCATGTGCAGAAAAAACTCTGGCAATCGGCAATATGTGTAG 2181 0.4163 MDQSSPYYNRFPQTPSSTKKGRSGYEPSDTETERQEIPRHERERRNFTLEETKDFTLMNKSPMALHRRHPSRFENEVSSASTASAPRRRHHSKSPYKLRVAEADVAVAVAGVASSSPIIGLNTRRNISPLSRPDIGRTVSPFREQRIEKPHYKRSVTAPRLRIQESNNGGRTNEMVNRQREASPFKAPSVGEINEMIAQVKLSQDPTSDYSSVLESTDSIHPGDLFFSRECNAFQAKNSSLPRRIEQREHFSPRPPVNTTRVPSERKGKNADIKMNMNILSRSTTVLSTSATSRKGSGTGKPSSVTSESSGKTTESMRKFTVNRKKNQKDTWFSCMRTGNCRTTRKSPERRPIDESSFIERAVVVESLPQFWADKHQPASLNGFICNRQEAQLLKELVSQGSCPHILLQGPSGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSSHHMELDVNSESNAKYALMGLIKEISNIYAVAPEVSNINFKSDFKVIVLYDVHKAVDNIRHIIKWIIDRYSDICKLVLCCEDDADIIEHVKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSAEQPIPVGWEEIVIEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILQKLVGHLLKRIEVSLRRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGNRQYV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1480 726 CDD AAA 387 427 - -
Gso1g1480 726 MobiDBLite consensus disorder prediction 1 94 - -
Gso1g1480 726 PANTHER OS02G0704966 PROTEIN 180 725 - -
Gso1g1480 726 Gene3D - 370 561 IPR027417 -
Gso1g1480 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 609 IPR027417 -
Gso1g1480 726 MobiDBLite consensus disorder prediction 1 23 - -
Gso1g1480 726 SUPERFAMILY post-AAA+ oligomerization domain-like 623 715 IPR008921 GO:0003677|GO:0006260
Gso1g1480 726 Gene3D - 562 620 - -
Gso1g1480 726 MobiDBLite consensus disorder prediction 284 325 - -
Gso1g1480 726 MobiDBLite consensus disorder prediction 24 51 - -
Gso1g1480 726 MobiDBLite consensus disorder prediction 248 269 - -
Gso1g1480 726 Gene3D - 623 716 - -
Gso1g1480 726 MobiDBLite consensus disorder prediction 284 317 - -
Gso1g1480 726 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 180 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1480 Gso-Chr1 51495520 51499858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1480 371 715 Core DNA Replication Machinery Family AT5G27740 37.356 4.97e-76 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1480 K10756 - gmx:100817775 1335.47