Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1468 ATGGGATTCTACACACAGAACCTTTTTTCTTCTTTCACCTCAGCTTCATCATGGTTCGAGGTGTACGCTGCCTTCTCCACATTCATGATGCTCCTCAGAACAGCATTCCATGACCTCATTCCCCAGCAATTCCGATCCCTCATTGTCTCAAAGCTAGAGTCCTTCTTCACCAAATACCAACCAAATAACGAAATCCGTCTCAAAATGAACCAATTTTGGGACGAAAATTTGGGAGACCGCAATGAACTTTTCGATGCTGCCCAGGAGTACCTCCCCACCAGGATTTCTCACACCTACAAGTCGCTCAAAGTTGGGAAACTGCAAGACGAGAAGCACATTGAGCTCGCAGTGGATGGAAGTGAAGACGTTGTGGACGAATTTGAAGGCACCAAATTCACTTGGAAGCTGGATGAAGGGTCCAAAGAGGACTCTAATAATCACAACAAGAAGTATAGCTTTGAATTAACCTTCAATGAGAAGCATAGAGAGAAAGCATTGGATCTGTATATTCCACATGTGCTTAAAACATATGAAGCCATAAAAGCTGAGAGGAGGATCGTAAGGATCTATTCCAGGTTAGATGGGTATTGGAACGATAGCGAGTTATCGCATCCTGCCACATTCGACTCACTGGCCCTGAGTCCCGAGTTGAAGAAAGATATCATTGATGATTTGGAACGGTTCCAGAGGAGGAAGGAACATTACAAGAAAGTGGGGAAGCCTTGGAAACGTGGCTACTTGTTGTATGGACCTCCTGGAACTGGAAAATCCAGCCTTATTGCGGCGATGGCGAACTACTTGAAATTCGATGTGTATGATTTGGAGCTTACTTCTATTTATTCTAACTCGGACCTCATGCGATCCATGAAGGAAGCATCTAACCGTTCCATCGTTGTGATTGAAGACATAGACTGCAACAAAGAGGTGCAGGCTAGATCAAGTGGTCTTTCAGACGATCAAGATTCAGTCCCTGACAATGAGGCTGCCAAGGTTAAGACAAATAGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGTTTGTGGTCAAGTGGTGGAGAGGAGCGAATTATAATATTCACTACTAACCACAAAGAAAAAATAGACCCTGCGTTGTTGCGCCCTGGTCGTATGGACATGCACATTCACTTGTCCTTCCTCAAAGGCAAGGCCTTTCGAGTCTTGGCTACCAATTATTTGAATATTGAAGGAGATCATCCACTCTTTGAAGAAATTGATGGACTATTGGAGAAATTAGAAGTCACCCCTGCAGTAGTAGCAGAGCAACTGATGAGAAATGAGGATCCTGATGATGCTTTGGAAACATTTGTTACATTTCTCAAAGAAATGGACAAGGATAGTAATTGCCACTTAGAGTTAAGAGGGACTAGTGAGTAG 1398 0.4371 MGFYTQNLFSSFTSASSWFEVYAAFSTFMMLLRTAFHDLIPQQFRSLIVSKLESFFTKYQPNNEIRLKMNQFWDENLGDRNELFDAAQEYLPTRISHTYKSLKVGKLQDEKHIELAVDGSEDVVDEFEGTKFTWKLDEGSKEDSNNHNKKYSFELTFNEKHREKALDLYIPHVLKTYEAIKAERRIVRIYSRLDGYWNDSELSHPATFDSLALSPELKKDIIDDLERFQRRKEHYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELTSIYSNSDLMRSMKEASNRSIVVIEDIDCNKEVQARSSGLSDDQDSVPDNEAAKVKTNRFTLSGLLNYMDGLWSSGGEERIIIFTTNHKEKIDPALLRPGRMDMHIHLSFLKGKAFRVLATNYLNIEGDHPLFEEIDGLLEKLEVTPAVVAEQLMRNEDPDDALETFVTFLKEMDKDSNCHLELRGTSE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1468 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 435 IPR027417 -
Gso1g1468 465 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 11 455 - -
Gso1g1468 465 PANTHER BCS1 AAA-TYPE ATPASE 11 455 - -
Gso1g1468 465 ProSitePatterns AAA-protein family signature. 356 374 IPR003960 GO:0005524|GO:0016887
Gso1g1468 465 CDD AAA 243 385 - -
Gso1g1468 465 SMART AAA_5 242 388 IPR003593 -
Gso1g1468 465 Pfam ATPase family associated with various cellular activities (AAA) 247 384 IPR003959 GO:0005524|GO:0016887
Gso1g1468 465 Gene3D - 383 450 - -
Gso1g1468 465 Pfam Domain associated at C-terminal with AAA 40 136 IPR025753 -
Gso1g1468 465 Gene3D - 199 382 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1468 Gso-Chr1 51387354 51389105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1468 216 384 Calmodulin-binding Proteins AT3G56690 28.249 2.36e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1468 - K08900 gmx:100789094 934.48