Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1457 ATGGAATGGATCATATGTGTTTGTGTTGTGATGGGCATGTTGTTCATAATGAATCGGTGGATTCTATGTGGCAAGAATGATGAGAAAACAGTGGCAAAGGGCAAAGTTCCAAAAGGGAACTCCGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATTGCTTCTGGCTACACCTCAACCCCTGTCAGTTTCTTGGAAAAGCGCAAGTCTTTGTACGGGAATGTGTTTAAGACATGCATTTTGGGAAGCAATGTGATAGTTTCCACTGACCCGGACGTGAACAAGGTGGTTCTGCAGAACCAAGCCAACAACTTCGTCCCCGCTTATCCAAAATCAATTAGAGAATTAATGGGGGAACAATCCATACTCAAAATGAACGGGACCATGCATAAGAAAGTGCACACACTCATCGCAGGGTTCCTACGATCCCCACAACTCAAAGCTCGAATCACCAGAGACATTGAGCACGCTGTCAAACAATGCTTCGCTTCTTGGACGCCCCACCAACCAATCTATGTTCAAGATCAAGTCAAAAAGATTACATTTCCTGTTTTGATCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGATTTGGACTTCCTGTATAGAGAATTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCACTCAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAGCAACTGAAAGATTATAATGCAGATGATCATGGTGATGCAGCAGTGAATGATGTGGTGGACGTACTATTAAGGGATAAGGTTGACTCGAACTCTAGCTCACGTTTGACTCCAGAAATGATAAGCCAAAACATAATAGAGATGATGATACCGGGGGAGGAAACTCTTCCTACGGCCATGACCATGGCCCTTAAGTTCCTCAGTGACTCCCCTCTCGCTGTATCCAAACTTCAGGAGGAGAACATGGAACTGAAGAGGCTGAAGACTAATTGCTCAGATGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCCGTCAATGACATAGAAATTAAAGGGTACCTAATTCCGAAACACTGGTGTGTTATGGCATCTCTTACTTCTGTTCACATGGATGGGAAGAACTATGAAAACCCTTTTAACTTTGATCCATGGAGATGGGAGAAAATTGGAATTGTGGCTGGTAACAATTGTTTTACCCCATTTGGCGGTGGACATAGACTATGCCCTGGATTAGAACTCTCCAGGCTAGAGCTATCTATTTTCCTTCACCACCTTGTTACAACTTACAGATGGATCGCTGAGAAGGATGAAATTATCTACTTTCCAACTGTCAAGATGAAGAGGAAGCTCCCAATTAGTGTGCAACCCATTATCGCATGA 1467 0.4274 MEWIICVCVVMGMLFIMNRWILCGKNDEKTVAKGKVPKGNSGWPLLGETLDFIASGYTSTPVSFLEKRKSLYGNVFKTCILGSNVIVSTDPDVNKVVLQNQANNFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQLKARITRDIEHAVKQCFASWTPHQPIYVQDQVKKITFPVLIKVLMSVGPGEDLDFLYREFAEFIKGLICLPLKFPGTRLYKSLKAKDRMVKMVRKIVEERKKQLKDYNADDHGDAAVNDVVDVLLRDKVDSNSSSRLTPEMISQNIIEMMIPGEETLPTAMTMALKFLSDSPLAVSKLQEENMELKRLKTNCSDDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSVNDIEIKGYLIPKHWCVMASLTSVHMDGKNYENPFNFDPWRWEKIGIVAGNNCFTPFGGGHRLCPGLELSRLELSIFLHHLVTTYRWIAEKDEIIYFPTVKMKRKLPISVQPIIA* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1457 488 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 Pfam Cytochrome P450 37 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 4 483 - -
Gso1g1457 488 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS E-class P450 group IV signature 421 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PRINTS E-class P450 group IV signature 437 455 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 Gene3D Cytochrome P450 25 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 PANTHER CYTOCHROME P450 26 4 483 - -
Gso1g1457 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gso1g1457 488 SUPERFAMILY Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1457 488 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1457 Gso-Chr1 51274927 51282265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1457 26 459 Cytochrome P450 AT3G13730 50.343 3.93e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1457 K12637 - gmx:100799030 915.605