Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1440 ATGGAGTCGATGGAGTCATGTATCCCACCAGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTACCTCAGGAAGAAAGTGGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATAGGGTATGACGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCCACCATGGCGGGGTTTTGGAAGGCAACAGGAAGAGACAAAGCAGTGTATGAAAGGGCAAAACTTATTGGGATGAGAAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCAAATGGACAGAAAAGTGATTGGATCATGCACGAGTATAGGCTTGAATCTGATGAGAATGGACCCCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAGAAAACCACTGGGCAAACGAAGACTATTAATATTGAAGGATGGGACTCAAGCTACTTCTATGAAGAAGCAAGTGGGGCAAGCACTGTGGTCGATCCAATTGAACTCATTTCAAGGCAATCTCAGAGCTTTGTAGCTCAAAACTTCATGTGCAAGCAAGAGTTAGAAGCAGATAACTTGAGTTGCATGCTTCAAGATCCATTTGTGCAACTTCCTCAGCTAGAAAGCCCATCTTTGCCATTAGTAAAGAGGCCAAGCACAGTGTCACTAGTATCAGACAATAACGAAGATGAAGACATTCAAAACAGGTTGTTATCCAACAACAACAACACAAAGAAAGTCACCACTGATTGGAGAGCCCTTGACAAGTTTGTAGCCTCTCAACTGAGTCAAGAAGTAGACACGCATGAAAGTAATGGAGTACCCTCAAGCTTTCAACCCCATGATGATAACCACGACATGGCACTGCTGCTACTGCAGAGTAGTAGGGATGAGGGGAACAGGTTGAGCCCATTTCTAAATACAAGCTCAGACTGTGATATTGGGATATGCGTATTCGAAAAATGA 1035 0.4367 MESMESCIPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYDEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWDSSYFYEEASGASTVVDPIELISRQSQSFVAQNFMCKQELEADNLSCMLQDPFVQLPQLESPSLPLVKRPSTVSLVSDNNEDEDIQNRLLSNNNNTKKVTTDWRALDKFVASQLSQEVDTHESNGVPSSFQPHDDNHDMALLLLQSSRDEGNRLSPFLNTSSDCDIGICVFEK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1440 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 324 - -
Gso1g1440 344 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Gso1g1440 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 324 - -
Gso1g1440 344 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Gso1g1440 344 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Gso1g1440 344 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1440 Gso-Chr1 51069100 51074050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1440 1 343 NAC Transcription Factor Family AT2G18060 64.151 6.27e-163 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso1g1440 NAM 5.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1440 - - gmx:100778767 704.901