Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1433 ATGACTCTGGTTCTCTTTTCCACTATACTAACTCATGATAAATACCCCCCCTCCCCTCTACCCCATAATCCACACTTCCCAAACCCTCTACTAAAACATTCAAAGTTTAGTTTGAACAAGGTGCATCAGGAGAGCAAAATAATGGCCATAAAAAAATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTGTCAAGAGATGCTCAAGTTTTGGCAAGAAGCAGACCTACAATGAAGAGGGTCTTCCCGATGATGTGCCAAAAGGCCATTTTGCGGTATATGTTGGGGATAACAGGACCAGATATATTATCCCAATTTCATGGCTGGCTCAGCCCCAGTTCCAAAGTCTGCTTCAAAGAGCTGAGGAGGAGTTTGGCTTCACCCATGACATGGGACTTACCATACCCTGTGATGAAGTTGCTTTTGAGTCCTTAACCTCCATGATGAGATAA 456 0.4298 MTLVLFSTILTHDKYPPSPLPHNPHFPNPLLKHSKFSLNKVHQESKIMAIKKSNKLPQAVVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGDNRTRYIIPISWLAQPQFQSLLQRAEEEFGFTHDMGLTIPCDEVAFESLTSMMR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1433 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 151 IPR003676 GO:0009733
Gso1g1433 151 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 41 151 - -
Gso1g1433 151 Pfam Auxin responsive protein 73 150 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1433 Gso-Chr1 51027457 51028314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1433 50 150 Calmodulin-binding Proteins AT4G34750 38.614 4.11e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1433 K14488 - gmx:100776099 295.819