Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1432 ATGATGGAACCTCAACAACAACAACAACAAGCACAAGGGAGCCAACAACAACAACAAAACGAGGATGGTGGCAGTGGAAAAGGGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCAACAAACGACCAGATAAGAATATTGAAGGAACTTTACTACAACAATGGAATTAGATCCCCGAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATCATAATCATAATAATGTCCCCATGCAAAGACCCCCAACTAATCCTTCTGCTGCTTGGAAACCTGATCTAGCTGATCCCATTCACACCACCAAGTATTGTAACATCTCTTCTACTGCAGGGATCTCTTCGGCATCATCTTCTGTTGAGATGGTTACTGTGGGACAGATGGGGAATTATGGGTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGCTCGATATCAGCTGGGGGTAGCAGTGGCCATGTTGGATTAATAAACCACAACTTGGGGTGGGTTGGTGTGGACCCATATAATTCCTCAACCTATGCCAACTTCTTTGACAAAATAAGGCCAAGTGATCAAGAAACCCTTGAAGAAGAAGCAGAGAACATTGGTGCTACTAAGATTGAAACCCTCCCTTTATTCCCTATGCACGGTGAGGACATCCATGGCTATTGCAACCTCAAGTCTAATTCGTATAACTATGATGGAAACGGCTGGTATCATACTGAAGAAGGGTTCAAGAATGCTTCTCGTGCTTCCTTGGAGCTCAGTCTCAACTCCTACACTCGCAGGTCTCCAGATTATGCTTAA 891 0.4489 MMEPQQQQQQAQGSQQQQQNEDGGSGKGGFLSRQSSTRWTPTNDQIRILKELYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDHNHNNVPMQRPPTNPSAAWKPDLADPIHTTKYCNISSTAGISSASSSVEMVTVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGLINHNLGWVGVDPYNSSTYANFFDKIRPSDQETLEEEAENIGATKIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHTEEGFKNASRASLELSLNSYTRRSPDYA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1432 296 PANTHER PROTEIN WUSCHEL 2 289 - -
Gso1g1432 296 CDD homeodomain 37 99 IPR001356 GO:0003677
Gso1g1432 296 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 289 IPR044555 GO:0003700|GO:0099402
Gso1g1432 296 ProSiteProfiles 'Homeobox' domain profile. 32 98 IPR001356 GO:0003677
Gso1g1432 296 MobiDBLite consensus disorder prediction 1 42 - -
Gso1g1432 296 Gene3D - 31 97 - -
Gso1g1432 296 SUPERFAMILY Homeodomain-like 30 103 IPR009057 -
Gso1g1432 296 SMART HOX_1 34 102 IPR001356 GO:0003677
Gso1g1432 296 Pfam Homeodomain 36 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1432 Gso-Chr1 51001422 51003354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1432 30 247 Wox Gene Family AT2G17950 44.800 2.28e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso1g1432 Homeodomain 9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1432 - - gmx:100775555 578.941