Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1425 ATGATTTCTTCCGTGTCCTTTCCAGCGTCTCTTCCCGCCGTTAACTTCTCCGGCAACGCCGTGGCTTCTCCGTCGTGCCGCGTCAAATCCAGGCCTATAGTTGCCTTCGCCACCGCCACCGCCACCGCGGAAGCTCGCTCTTCCTGGACGGAGCAACCGAGACCTTCGTATCTGAACTCCTCTTGCTCTTCGCTCTACGAGGTTCTCGGCATCCCCGCCGGCGCCTCTAACCAAGAAATCAAGGCGGCGTACCGGCGACTGGCCAGAGTCTTCCACCCCGACGTGGCGGCGATTGACCGGAAAAACTCATCCGCCGATGAGTTCATGAAGATCCACGCTGCGTACTCTACTCTCTCGGATCCCGACAAGCGCGCCAACTACGATCAGAGGCTCTTCCGGCGACAACGGCCGTTGTCGACGGCGGCGGTGTTCTCCGGTTATACGCGTCGGAACTGGGAAACGGATCAGTGTTGGTAG 477 0.5996 MISSVSFPASLPAVNFSGNAVASPSCRVKSRPIVAFATATATAEARSSWTEQPRPSYLNSSCSSLYEVLGIPAGASNQEIKAAYRRLARVFHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDQRLFRRQRPLSTAAVFSGYTRRNWETDQCW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1425 158 CDD DnaJ 66 120 IPR001623 -
Gso1g1425 158 SMART dnaj_3 63 123 IPR001623 -
Gso1g1425 158 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Gso1g1425 158 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Gso1g1425 158 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Gso1g1425 158 PANTHER - 1 158 - -
Gso1g1425 158 PRINTS DnaJ domain signature 66 84 IPR001623 -
Gso1g1425 158 PRINTS DnaJ domain signature 84 99 IPR001623 -
Gso1g1425 158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso1g1425 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 158 - -
Gso1g1425 158 Pfam DnaJ domain 65 128 IPR001623 -
Gso1g1425 158 Gene3D DnaJ domain 55 150 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1425 Gso-Chr1 50880504 50881398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1425 66 128 C2H2 Transcription Factor Family AT1G74250 44.776 1.44e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1425 - - gmx:100816709 307.375