Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1417 ATGGCTGTTACTGTGGCCATGTTACCTCGTTGGTCGGTGTTTCTTCTTTTTCTGTTTGTCTTGTGTAGCTCAGGAGCAAAGGTTGTCGCCATTGATGTACATGCAGCAAAGCGTCTCATCCAGACCGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAGTTCAAGAAAGGGCATGTGGATGCAGTTAATGTCCTTAACATTCCATACATGTTGAATACACCCAAGGGCAAGGTAAAGAATCCAGACTTTCTGAAGGAGGTTTCATCAGCTTGCAACAAAGAAGATCATCTCATTTTGGGTTGTCAAAGTGGGGTGAGATCTCTGTATGCAACTGCTGATCTTCTGTCTGAAGGTTTTAAGAATGTGAAAGACATGGGAGGAGGTTATGTGGACTGGGTTAAAAACAAGTTTCCAGTGATTATACCAGTGGCCAAAGAGGAACTATAA 450 0.4311 MAVTVAMLPRWSVFLLFLFVLCSSGAKVVAIDVHAAKRLIQTGSIYLDVRTVEEFKKGHVDAVNVLNIPYMLNTPKGKVKNPDFLKEVSSACNKEDHLILGCQSGVRSLYATADLLSEGFKNVKDMGGGYVDWVKNKFPVIIPVAKEEL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1417 149 SMART rhod_4 31 139 IPR001763 -
Gso1g1417 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Gso1g1417 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
Gso1g1417 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 147 - -
Gso1g1417 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 147 IPR044684 GO:0003824
Gso1g1417 149 CDD RHOD 35 134 - -
Gso1g1417 149 Pfam Rhodanese-like domain 36 135 IPR001763 -
Gso1g1417 149 Gene3D - 21 140 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1417 Gso-Chr1 50798308 50800089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1417 27 140 Sulfurtransferasese or Rhodanese AT5G66170 54.386 3.38e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1417 - K15692 gmx:100815122 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1417 1 50798308 50800089 Gso11g0657 11 5908204 5909851 GST
Gso1g1417 1 50798308 50800089 Gso2g0399 2 4245513 4247522 PCT
Gso1g1417 1 50798308 50800089 Gso16g1010 16 27811380 27813290 PCT
Gso2g0399 2 4245513 4247522 Gso1g1417 1 50798308 50800089 PCT
Gso16g1010 16 27811380 27813290 Gso1g1417 1 50798308 50800089 PCT