Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1411 ATGGCGGAACCTGTTGTTGACGACGAATATCTCAAGGAAATAGACAAGGCTCGACGTGAACTTCGCGCTTTCATCACCAGCAACCAATGCGCTCCTCTCATGCTTCGATTAGCGTGGAACGATGCTGCCACCTACGATGCCAGAAACAGAGCAGGAGGCCCCAACGGTTCTATCAGGACTGATAAAGAGTTGAAACACGAAGCAAACGAGGGATTGTTAAAAGCAACTCAATTATGTGAGCATGTGAAGGCCAAACTTAAAAAAGTTTCATACGCAGACCTTTACCAGCTAGCTGGTGTTGTTGCAATAGAGGTCTCTGGGGGTCCAACTATTGAATTTTTGCCTGGGAGAAAAGATTCAATGGAATCTTCAGCAGAAGGGCTTCTTCCAGATGTCAAACAAGGTGCATCGATTATAAGGAATATATTTTCTCGTATGGGTATAAGTGATGATAAACACATCGTTGCCCTATGTGGAGGCCTCACTTGGGGGGAAACACTTAAAGATCGTTCTGACTCTAAAGGTCAATGGCCAAAGGACCCTTTGAAGTTTGATAACTCCTATTATAAGAAAATATTGAGTAAGGATTTATCATCTAGGCTTCCCATAGAAGATGCTTTACTAACCGATCAAAGCTTCCGCCGCCATGTTGAAGAGTATTCAAAGGATGAGAATAGTTTCTTCAAAGAATATGCAATGTCACATAAGAAACTCTCAGAACTAGGCTACAATCTCAAGAAGCAAAATCAATCAAAGGTACCAGATGAGGAGCAAAATCAGCCCAAGGGACCATATGAGAAGCTAAATCAGCACAGGGGACTTATAGGAATCGGTATAGTATCCGTGGTGACCGTGATATTAGGTTACTTACTCAAGAGGAAGAAAAACCAGTTGAAGAAATGA 903 0.4241 MAEPVVDDEYLKEIDKARRELRAFITSNQCAPLMLRLAWNDAATYDARNRAGGPNGSIRTDKELKHEANEGLLKATQLCEHVKAKLKKVSYADLYQLAGVVAIEVSGGPTIEFLPGRKDSMESSAEGLLPDVKQGASIIRNIFSRMGISDDKHIVALCGGLTWGETLKDRSDSKGQWPKDPLKFDNSYYKKILSKDLSSRLPIEDALLTDQSFRRHVEEYSKDENSFFKEYAMSHKKLSELGYNLKKQNQSKVPDEEQNQPKGPYEKLNQHRGLIGIGIVSVVTVILGYLLKRKKNQLKK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1411 300 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 293 - -
Gso1g1411 300 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 293 IPR044831 GO:0004601|GO:0034599
Gso1g1411 300 Gene3D Peroxidase, domain 2 130 235 - -
Gso1g1411 300 ProSiteProfiles Plant heme peroxidase family profile. 31 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 Gene3D - 17 242 - -
Gso1g1411 300 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 Pfam Peroxidase 19 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso1g1411 300 PRINTS Plant ascorbate peroxidase signature 219 243 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1411 Gso-Chr1 50740353 50744291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1411 88 242 Peroxidase AT4G31760 28.061 3.14e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1411 K00434 - gmx:100813526 589.726