Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1392 ATGTCACTAGAGCCCCACCGAATTGTCCTCAACGTCAAACGCGGCTCGTGCAACACGCTCTCCACAATCCGCAGTGACAGGACCATGCAGCATGCCTTCTTCTCCAACAACAACAACAACCAGCACTACAATGGCGATGGAGACGTCAACGACAAGGAAGACAACGATGACACCGATTGCAAAGACTCGAGGTCGGATTCTCGAACGGAGACCTCAGCGAAGCGAACGACAGTGAAGCGACTGCAACTAGTGTGGACCCTGCAGCTTCACAAGAGGTTCGTGGACGTGGTGGCGCACCTCGGGATCAAAAACGCAGTGCCGAAGACGATTATGCAATTGATGAACGTGGAAGGGTTGTCCCTATAA 366 0.5301 MSLEPHRIVLNVKRGSCNTLSTIRSDRTMQHAFFSNNNNNQHYNGDGDVNDKEDNDDTDCKDSRSDSRTETSAKRTTVKRLQLVWTLQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLSL* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1392 121 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 120 - -
Gso1g1392 121 MobiDBLite consensus disorder prediction 46 74 - -
Gso1g1392 121 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 82 120 IPR006447 GO:0003677
Gso1g1392 121 Gene3D - 76 121 - -
Gso1g1392 121 MobiDBLite consensus disorder prediction 34 74 - -
Gso1g1392 121 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 120 IPR044841 GO:0003700|GO:0006355
Gso1g1392 121 SUPERFAMILY Homeodomain-like 77 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1392 Gso-Chr1 50576906 50577271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1392 1 120 G2-like Transcription Factor Family AT5G59570 44.697 6.31e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso1g1392 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1392 - - gsj:114393751 214.927