Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1383 ATGGTGATCGAGCATGACATTGAGAGTTGCGGGAGCAGAGCGATGCAATCTTTGCACGCGCATCACCCTCGCCACCACCGGCAGAAGCTGGAGGTGTACAATGAGGTGCTTCGGCGAATTCAGGAATCGGATTGCGAGGAGGGGCATGTTCCCGGCTTCGACGATCAGCTTTGGCTCCACTTCAATCGCCTTCCCGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTTTAGCTCATAAGAGATTGCTTAAGTTGGCAGAGGACCCTGCTTCTCGACCTGCATTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGCGGTGCAAATTATGCTGATTCCATACATTTAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACATTTGGTTCATCCTCTAACCTTGAAGCTCTTGCACTTCAGAAAAACAAAAATAACATTGAAGATGGGGGAAGTGCTATGAGTGTAACACCATATTTCCGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACAGCAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACTACTGATGGATTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTGAAAGGTGTGTTGGAAAAGGAAATTTTCAAGGAGCAAAATATGTCAAATCAGGGCATACATTATGCTACCAATGAACAATACCAGGCAAGGATGGAACCCTCCCCTCATTGCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAGATTGATACCAACCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGTACATATTGTAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAGCGCATAAGTACAGATATGCTGAGGGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTAGGCCCCCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAGAATAATATAATTCACCGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGGGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACTGGAGAACTGCCTTACTCTTGCCTGACCCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTGCGGCCTACAATTCCCAAAAATACGCACCCAAGACTTTCTGAACTTCTTCAGCGGTGCTGGCAACAAGATCCAACGCAAAGACCAAATTTCTCTGAAATAATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGATCACAAAGATAAATCATCCCATGGCTTTCTCTCAGCTCTTAGACGGGCCCATCATTGA 1710 0.4409 MVIEHDIESCGSRAMQSLHAHHPRHHRQKLEVYNEVLRRIQESDCEEGHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYADSIHLDPSEKEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQKNKNNIEDGGSAMSVTPYFRPMHEITFSTVDKPKLLSQLTAILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLEKEIFKEQNMSNQGIHYATNEQYQARMEPSPHCIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPTQRPNFSEIIEILQQIAKEVNDHKDKSSHGFLSALRRAHH* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1383 569 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Gso1g1383 569 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
Gso1g1383 569 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Gso1g1383 569 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Gso1g1383 569 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Gso1g1383 569 CDD ACT_TyrKc 180 246 - -
Gso1g1383 569 SUPERFAMILY Protein kinase-like (PK-like) 270 542 IPR011009 -
Gso1g1383 569 ProSitePatterns Protein kinases ATP-binding region signature. 299 320 IPR017441 GO:0005524
Gso1g1383 569 SUPERFAMILY ACT-like 180 244 IPR045865 -
Gso1g1383 569 ProSiteProfiles ACT domain profile. 182 260 IPR002912 -
Gso1g1383 569 CDD STKc_MAP3K-like 299 542 - -
Gso1g1383 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Gso1g1383 569 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 559 - -
Gso1g1383 569 SMART serkin_6 293 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1383 569 Gene3D Transferase(Phosphotransferase) domain 1 372 564 - -
Gso1g1383 569 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Gso1g1383 569 ProSiteProfiles Protein kinase domain profile. 293 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1383 569 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 559 - -
Gso1g1383 569 Pfam Protein tyrosine and serine/threonine kinase 293 542 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1383 Gso-Chr1 50490253 50498992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1383 8 568 MAP Kinase Kinase Kinase AT4G35780 70.826 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso1g1383 PK_Tyr_Ser-Thr 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1383 - - gmx:100803377 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0473 2 4994294 4996240 Gso1g1383 1 50490253 50498992 PCT
Gso16g1116 16 29931137 29933409 Gso1g1383 1 50490253 50498992 PCT