Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1382 ATGAAACTAATGACAGCAACAACAACGTTTGATGTCTCTGCCACATGCTTCCGTGCCCCTCCTCCTTCGTGCTCAATGAATCCATGCCACACCAGTTTTTCAGTTATAAACTCCCTGAATCCTCACAAGGGACGACGGATAAGCGTTGCTGTTCCACCCAAGTTTCCAAACTTCCGGAGGGAAGCATCTCTGCAGGGGAATTTGGAGGCTATTAGAGTCCCAACTTCGGTGCCTGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCATCGATATTTGGATGTAAGGACCCCGGAAGAGTTCGATGCTGGACACGCTCCTGGCGCAATTAACATTCCTTATATGTTCAGAGTTGGATCAGGGATGACAAAGAACAGCAACTTTATTAGAGAGGTGTCTTCACAGTTTAGGAAAGATGATGAAATTATTGTCGGGTGTGAGCTTGGTAAAAGATCTATGATGGCCGCAAGTGACTTGCTAGCTGCTGGGTTCACTGGACTCACAGACATGGCTGGTGGTTATGCTGCATGGACACAAAATGGACTTCCAACAGAGCTATGA 561 0.4724 MKLMTATTTFDVSATCFRAPPPSCSMNPCHTSFSVINSLNPHKGRRISVAVPPKFPNFRREASLQGNLEAIRVPTSVPVRVAYELLLAGHRYLDVRTPEEFDAGHAPGAINIPYMFRVGSGMTKNSNFIREVSSQFRKDDEIIVGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTEL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1382 186 ProSiteProfiles Rhodanese domain profile. 86 186 IPR001763 -
Gso1g1382 186 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
Gso1g1382 186 Gene3D - 62 185 IPR036873 -
Gso1g1382 186 SMART rhod_4 76 183 IPR001763 -
Gso1g1382 186 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 72 184 IPR036873 -
Gso1g1382 186 CDD RHOD 93 177 - -
Gso1g1382 186 Pfam Rhodanese-like domain 92 179 IPR001763 -
Gso1g1382 186 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1382 Gso-Chr1 50480012 50482452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1382 76 183 Sulfurtransferasese or Rhodanese AT5G66170 45.455 2.45e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1382 - - gmx:100305968 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1382 1 50480012 50482452 Gso11g0657 11 5908204 5909851 GST
Gso1g1382 1 50480012 50482452 Gso2g0399 2 4245513 4247522 PCT
Gso1g1382 1 50480012 50482452 Gso16g1010 16 27811380 27813290 PCT