Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1369 ATGGCTTGTCTGAGCCGCCACCACCACCACCACCGCTCCTGGCTCACTTCCCCCGACGACATGCTCCAACGCTGCCCCCTCTCCGCCCACCACCACCGTCTCCGCGATGATGACGCCGAGCCTATCTACCTTCCCTCTCTCTCCTCCGCCTACCGCATCTTCCCCGTCTACGCCATGGGCGCCCCCGACCCGATTTGGAAGGCCGTCAGGGACGAAGCCAAGCTCGAGGCGGAGAAGGAGCCGATTCTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTGGAGCAAGCATTGGCGTTTGTGGTGGCCAACCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTTATGGATATCTTCTGTCTTGTCATTTTGCATGACAAAGCTATCCAGCGATCCATTCGCCTCGATGTTCAGGCATTAAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTTGTATACGAAGGGTTATCATGCTCTGCAAGTACATCGGGTAGCTCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGGATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCACTGATGCATGGCGTAACATTAGGAGGCACGGGGAAGGAAATAGGTGATCGTCATCCCAAAGTAGGTGAAGGGGCACTAATTGAAGCTAGTGCAACTATACTTGGGAATATAAAGATTGGTGAAGGTGCCATGATAGCTGCGGGTTCCCTGGTGTTAAAAGATGTCCCTCCCCACTGCATTGCAGCAGGAATACCAGCTAAAGTTATTAGTGCTCTACAGGAGCATGACCCATCTTTAACCATGAAGCATGATGCTAGTAAAGATCTTTTCACACATGTAGCTACTAATTTCATAGATGAAAAGCCCAATGGAGCTCAGAATCCCGATAGAAATGAAGTTAACAATTGA 1041 0.5024 MACLSRHHHHHRSWLTSPDDMLQRCPLSAHHHRLRDDDAEPIYLPSLSSAYRIFPVYAMGAPDPIWKAVRDEAKLEAEKEPILSSFLYASILAHDCLEQALAFVVANRLQNPTLLATQLMDIFCLVILHDKAIQRSIRLDVQALKDRDPACLSYCSALLYTKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIEASATILGNIKIGEGAMIAAGSLVLKDVPPHCIAAGIPAKVISALQEHDPSLTMKHDASKDLFTHVATNFIDEKPNGAQNPDRNEVNN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1369 346 Pfam Serine acetyltransferase, N-terminal 65 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso1g1369 346 Pfam Bacterial transferase hexapeptide (six repeats) 249 282 IPR001451 -
Gso1g1369 346 Gene3D Hexapeptide repeat proteins 199 327 - -
Gso1g1369 346 SMART SATase_N_2_a 65 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso1g1369 346 PANTHER SERINE ACETYLTRANSFERASE 61 329 - -
Gso1g1369 346 Gene3D serine acetyltransferase, domain 1 56 198 IPR042122 -
Gso1g1369 346 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 258 286 IPR018357 GO:0016740
Gso1g1369 346 TIGRFAM cysE: serine O-acetyltransferase 137 298 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso1g1369 346 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 61 329 - -
Gso1g1369 346 CDD LbH_SAT 196 296 IPR045304 -
Gso1g1369 346 SUPERFAMILY Trimeric LpxA-like enzymes 63 313 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1369 Gso-Chr1 50378225 50382140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1369 54 335 Miscellaneous Gene Families AT2G17640 71.525 1.33e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1369 K00640 - gmx:100796461 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1369 1 50378225 50382140 Gso11g0715 11 6360783 6365800 GST
Gso1g1369 1 50378225 50382140 Gso2g0355 2 3882187 3886577 PCT
Gso1g1369 1 50378225 50382140 Gso16g0956 16 26501157 26504944 PCT