Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1366 ATGAAGATATCTGATGAGAACAGTTCTAAACCAATCAACCCCACAAGTTTTCAAGGAGGGATAGAATGTGTGGGGAACAGAAAGATGGGGCAGAACAGAAGGGCTTTGAGCGTGATCAATCAGGATCTGGTGGCGGAAGGGAGACCTTACCCTTGTGTTGTTAACAAAAGGGCATTGGCAGAAAAACACGATGTTTGTGAGAAGAAGCAGGCGGATCCAGGGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCACACAGAAAAATCGTGCCGAGGGAACCAAGAAGTCAAACTTGGGGAATTCAAATTCGAATGGATTTGGAGACAGCATATTTGTCGATGAAGAACACAAGCCAACTACGGATGACCAGCCAGTGCCAATGTCTTTAGAGCAGACAGAACCAATGCATAGTGAATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATTGAAGAGACTGTTTTGGACATTGATACCTGTGATGCAAACAACCCTCTTGCAGTCGTGGACTATATTGAAGATCTTTATGCCCACTACAGAAAAATGGAGGGTACTAGCTGTGTCTCGCCTGATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTAATTGAGGTGCACGACAAATTTGACCTCTTGCACGAGACCTTGTTTCTCACTGTCAATCTTATAGATCGATTTTTGGCAAAACAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCCATGCTTTTGGCATGCAAGTACGAAGAAGTTTCTGTACCTGTGGTGGGGGATCTAATTCTCATATCAGACAAAGCATACACAAGGAAGGAAGTTCTTGAAATGGAGAAGTTGATGGTGAACACATTGCAGTTTAACATGTCTGTGCCAACGGCATATGTTTTTATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGTTATTGGCTTTCTTCCTGGTAGAGCTAACTCTTGTGGAGTATGAGATGCTGAAGTTCCCTCCATCTTTGCTAGCAGCATCTGCTGTCTACACAGCCCAATGCACAATTTATGGTTTCAAACAATGGAACAAAACATGTGAATGGCACTCCAATTACTCAGAAGATCGGCTATTAGAGTGCTCAACATTAATGGCTGATTTTCATCAGAAGGCTGGGAATGGGAAACTAACTGGGGTACATAGGAAGTACTGCTCATCTAAATTTAGCTATACTGCAAAATGTGAACCACCACGTTTTCTTCTGGAGAAACCATTGTAG 1299 0.4296 MKISDENSSKPINPTSFQGGIECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRALAEKHDVCEKKQADPGHRPITRRFAAQIASTQKNRAEGTKKSNLGNSNSNGFGDSIFVDEEHKPTTDDQPVPMSLEQTEPMHSESDQMEEVEMEDIIEETVLDIDTCDANNPLAVVDYIEDLYAHYRKMEGTSCVSPDYMAQQFDINERMRAILIDWLIEVHDKFDLLHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFLVELTLVEYEMLKFPPSLLAASAVYTAQCTIYGFKQWNKTCEWHSNYSEDRLLECSTLMADFHQKAGNGKLTGVHRKYCSSKFSYTAKCEPPRFLLEKPL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1366 432 PANTHER CYCLINS 22 425 IPR039361 -
Gso1g1366 432 SUPERFAMILY Cyclin-like 306 425 IPR036915 -
Gso1g1366 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Gso1g1366 432 Gene3D - 179 419 - -
Gso1g1366 432 MobiDBLite consensus disorder prediction 89 133 - -
Gso1g1366 432 CDD CYCLIN 208 297 IPR013763 -
Gso1g1366 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Gso1g1366 432 SMART cyclin_7 311 393 IPR013763 -
Gso1g1366 432 SMART cyclin_7 214 298 IPR013763 -
Gso1g1366 432 PIRSF Cyclin_A_B_D_E 21 432 IPR039361 -
Gso1g1366 432 SMART Cyclin_C_2 307 424 IPR004367 -
Gso1g1366 432 CDD CYCLIN 305 391 IPR013763 -
Gso1g1366 432 Pfam Cyclin, C-terminal domain 307 423 IPR004367 -
Gso1g1366 432 MobiDBLite consensus disorder prediction 89 112 - -
Gso1g1366 432 PANTHER CYCLIN-B2-1 22 425 - -
Gso1g1366 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
Gso1g1366 432 Gene3D - 193 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1366 Gso-Chr1 50345235 50348503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1366 4 428 Core Cell Cycle Gene Families AT1G20610 58.525 2.53e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1366 K21777 - gmx:100798068 850.506