Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1348 ATGAGTGGTGTTGGTGGTGGGTGCCCCTGCCCCAGGGGCAATAGTGAGTGTTCCATGGAAGATCTGAATGGTGATACGGTGGGGAATTTGAATCAGAATGCTGCAAAACCTCCAAGGGACCATTCGGTTATGCGCCATTGCAGCAGCTCTTCTTGGTCTGCTGAACCGGAATCAAATATTAATATTGTTGGACTTAAATCAAGCACAGAAGAAAAACCAGACTTTTTAGTTGTATTGCGATCTGGATGTTGTTCTGACAAAGGACCAAAGCAATACATGGAGGATGAGTTCATATGTGCTGATATTCTTAGTGAATGTGTCGATCTAAGGGAAGACCTCCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGCCATGGTGGTGTTGATGCAGCATCATTTACCAGAAAGAACATTCTCAAGTTTATTGTTGAAGATGCTCATTTCCCGTGTGGAATTAAGAAAGCAGTTAAGTGTGCATTTGTGAAGGTTGATCTTGCGTTTAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACCGCTCTAATAGCCCTTATGTTGGGAAGTTCCATGCTTATTGCCAATGCAGGAGATTCACGTGCTGTATTGGGCAAACGGGGCAGAGCCATTGAACTTTCCAAAGACCATAAACCAAATTGCACATCTGAAAGACTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCGGTGGCGCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCCAAGAGTCCCTTAAGTTCTGAACCTGAACTGGAGGAGATTGTGCTGACAGAAGAAGATGAGTTTTTGATAATCGGTTGTGATGGATTGTGGGATGTGATGAGTAGCCAATGTGCTGTTACAATGGTGAGGACGGAGCTCATGCAGCACAATGATCCCACCACATGTGCAAAAGTACTTGTTTCTGAGGCCCTCCAACGCAACACGTGTGACAACCTGACAGTTGTGGTGGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGAGTTTTGAATGGTAGATGA 1125 0.4453 MSGVGGGCPCPRGNSECSMEDLNGDTVGNLNQNAAKPPRDHSVMRHCSSSSWSAEPESNINIVGLKSSTEEKPDFLVVLRSGCCSDKGPKQYMEDEFICADILSECVDLREDLPSPAAFYGVFDGHGGVDAASFTRKNILKFIVEDAHFPCGIKKAVKCAFVKVDLAFRDASALDSSSGTTALIALMLGSSMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIIGCDGLWDVMSSQCAVTMVRTELMQHNDPTTCAKVLVSEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1348 374 PANTHER PROTEIN PHOSPHATASE 2C 16 361 IPR015655 GO:0004722|GO:0006470
Gso1g1348 374 SUPERFAMILY PP2C-like 75 341 IPR036457 -
Gso1g1348 374 CDD PP2Cc 80 340 IPR001932 -
Gso1g1348 374 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Gso1g1348 374 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Gso1g1348 374 Gene3D - 65 344 IPR036457 -
Gso1g1348 374 SMART PP2C_4 70 338 IPR001932 -
Gso1g1348 374 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 16 361 - -
Gso1g1348 374 ProSiteProfiles PPM-type phosphatase domain profile. 80 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1348 Gso-Chr1 50136988 50139883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1348 64 372 PP2C-type Phosphatase Gene Family AT3G51470 76.699 2.40e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1348 K14803 - gmx:100786416 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1348 1 50136988 50139883 Gso11g0735 11 6566966 6570168 GST