Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1339 ATGGTCATGGAGGGAAGAATCTGCGAGGAATTAAAGCCCAGGTATTATGCTCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCATCTTGCCATCACTCCCTTTGATGTCTTGAAAGTCAACATGCAGGTGCACCCAATTAAGTATTACAGTATTTCCTCTTGCTTTACTAGCTTACTGAGGGAACAAGGGCCATCTGTTCTTTGGAAAGGTTGGACCGGCAAGTTCTTTGGATATGGTGCTCAAGGAGGATGCAGATTTGGTCTCTATGAGTATTTTAAAGAGGTTTATTCCAATGTATTGGTAGACCAGAACAGGAGTTTTGTTTTCTTTCTTAGTAGTGCGTCTGCTGAAGTGTTTGCCAATGTAGCTCTATGTCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCCTGTTTTGCTAAGGGATTGTATGATGGCTTTCCAAAGTTATATGCATCAGAAGGCACACGAGGATTCTACCGTGGACTAATTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACATTTGAGCATTCCGTTGATTTTTTGTATCGGAACGTGGTCAAAAGAAAAAAGGAGGACTGTTCAATAGGTCAACAACTTGGTGTAACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGTAGCTTCATTTCTAATCCGGCTGACAATATTGTATCTTCTCTTTATAACAGAAAGGCTGATAGTCTTGCACTGGCTATCAGAAATATTGGGCTAGCCAATCTATTTACCAGGAGCCTTCCTATTAGAATGTTGCTAGTTGGTCCTTCTATAACTTTGCAATGGTTTTTTTATGACACCATCAAAATTTTAGGTGGAATGCCAACTAGTGGTGAAGTTAGAACTGACGTGAGAGGAGATGGGGCAGGCTAG 921 0.418 MVMEGRICEELKPRYYALCAIGGMLSAGTTHLAITPFDVLKVNMQVHPIKYYSISSCFTSLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKEVYSNVLVDQNRSFVFFLSSASAEVFANVALCPFEAVKVRVQAQPCFAKGLYDGFPKLYASEGTRGFYRGLIPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEDCSIGQQLGVTCLAGYAAGSVGSFISNPADNIVSSLYNRKADSLALAIRNIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKILGGMPTSGEVRTDVRGDGAG* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1339 306 SUPERFAMILY Mitochondrial carrier 15 283 IPR023395 -
Gso1g1339 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Gso1g1339 306 PANTHER PHOSPHATE CARRIER PROTEIN 4 303 - -
Gso1g1339 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 287 IPR018108 -
Gso1g1339 306 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 303 IPR044677 GO:0005315|GO:1990547
Gso1g1339 306 Pfam Mitochondrial carrier protein 111 195 IPR018108 -
Gso1g1339 306 Pfam Mitochondrial carrier protein 18 100 IPR018108 -
Gso1g1339 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 191 IPR018108 -
Gso1g1339 306 Gene3D Mitochondrial carrier domain 16 288 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1339 Gso-Chr1 49999025 50003431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1339 3 300 Chloroplast and Mitochondria Gene Families AT2G17270 66.221 1.53e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1339 K15102 - gmx:100788561 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1339 1 49999025 50003431 Gso11g0743 11 6650826 6655469 GST