Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1324 ATGACCATTGATGTGCCACCATCCGGTGCCCAAAGTGTGAGGACAAATAGACCTTCCTTTAGTTCTAGCAATGGCATTGAGGCTACCCCAGTACACAACTATGCATCTGTTAGCAATGGTGATGGTTATGATAGTGATGGCTCCAATTTTGCGCCACTTACACCAACAACTCTATCAATGGCTATTCCATCAGAACTTGCTGGAGCTGTTCCCTTGATTGATAAATTCCAGGTGGAAGGATTCTTAAAATTGATGCATAAACAAATTCAATCTGCTGGAAAACGTGGATTCTTTTCTAAAAGATCCGTGGGCCCTCAAGTTCGAGAGAAGTTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTACATCAATGCTTAAGCTGAATGGTGACTTGGCAAGCCGAGCAACAAAATTATTTCAAATAATTTTGAAATATATTGGAGTTGATTTATCCGATCGTGTAACTCCAATAAGCTTAGAAGAACAAGTTGAGCTTGTTGGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTCTTTGTCCAATTATCAAAACAAACGAGAAACAGCCCTGAGAGCAGGGAATACTTGATTAAAGCATGGGAACTAATGTATTTATGTGCTTCATCCATGCCTCCTAGCAAAGACATTGGAGCATATCTATCAGAATATGTTCACAATGTGGCATATGGTGTGACTGCTGATCCTGAAATCCGAGCCCTTGCATTAAATACATTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGGCCTGTTGAGATCGAAGCTCTGTTGACAGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACGTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTCGAGGAACTTGCAGGGATCATTAAACTGTCAACATACTCAAGCTTTAGCTTGTTTGAATGTCGTAAAGTTGTTACCGGCACCAAATCACCTGATTCTGGGAATGAGGAGTACATTGGGCTAGATGACAATAAATATATTGGGGATCTCCTAGCGGAATTTAAGGCAGTGAAGGATCGAAGTAAGGGAGATATATTGCACTGCAAACTAATATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTACCCTATTGGAAGGGATGATGCTGCCCAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGACTGGAATTCATTTTTGGAGCGATTTCTGCCCAGACAAATAGCAATGACTCGAGCAAGACGGGAATGGGAGTTGGACATTCTTTCTTGTTATCATTCACTGGCGCATGTGACAAAAGAGGATGCTAGACAGCAATTTCTGCATATATTGAGAACACTTCCCTATGGGTTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTATTGCCTGGACGAATAATATTGGGAATCAACAAGAGAGGAGTCCATTTTTTCCGTCCCATTCCAAAGGAATATATGCACTCTGCTGAGTTGAGGGACATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTTCAGTTTGAAACAAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGCTATTCCAAAGCTCGATCTGCTGCGGGTGGTCCTTTGAATGAAGACATTTCTAATGATTTTAAGCCTTCTAATTTGGAATTATACGAAAAACGTGTTCAAGAATTATCAAAACTTGTTGAAGAGTCTCAAAGGAATGCTGATCAATTGCTGGATAACTTGCGTGAGAAGCAAAAACAAGAAGAGGAAATGCTACAAGAATTAGAGGGCTTAAAAAGATCTTTAACAGCTGGCAAGCAGAGTCTTGCAGAAGTTACAAATGACCGTGACAAGCTTAGGTCATTATGTGATGAAAAAGACAAGGCACTTCAGGCTGAAATTCTAGAGAAAAGAAGCATGGAAGCAAAGATGGCCGAGTTGAGTAATCTGGTTACAAAGAACACTACCAAAAAGGACTGCACTCAAACAAATAACCAAGTGTCACAGAAACTCGAAGATGACCTAAAACTATGTAAAGGTGAGCTGCGTGTAACTGAAGAAACTATCAAAAGCTTGAGAAGTGATAAGTTGATTTTGGAACAGAAGCTATCTGAGCTTGAGAAGAAGAGTGCTGAAGAGATTAATTCTCTTCAATGGAAACTTGAGCAAGAACGCAAAACTCTGAACTCTAAAGTGTATGACCTTGAACGAAAACTGGATGTGTTTAGACAAGAATTAACTGTAGCTGAGTCTACACTCTCGGTCAAGGACTCTGAATTGGCTGCATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAGCAAACAGCTGCCATACTGAAGATGCAAGCAGTTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTCAGAAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAGATAAGAGTTTATTGTCGGTTAAGACCTCTTAGTGAAAAAGAGATTGCAAGCAAAGAAAGAGATTCTCTTACTACTACTGATGAGTTTACTGTTGAGCATCCTTGGAAAGATGATAAACCAAAACAACACATTTATGACCGTGTGTTTGATGGTGATGCCACTCAAGAAGATATATTTGAGGATACAAGGTACTTAGTGCAATCTGCTGTGGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAGACTTTTACAATCTATGGAGTTGAAAACAATCCTGGGCTTACCCCTTGTGCTACTGCGGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCTTTCTCGTTGAAGGCATATATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTACCGAAGAATGCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCCAAGGGAATGGTAGCAGTAGAAAACGTAACAATTGTGTCAATTTCTACTATGGAGGAATTAAATAGCATAATACAGAGGGGTTCTGAGCAGCGACATACATCAGGGACACAGATGAATGATGAAAGTTCAAGATCTCATCTCATACTATCAATTGTCATTGAAAGTACTAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTAAAAAAGTCGGGCTCTTCAGGTAGTCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGCTAACTATGTTGATGAGTGATTCACTAGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCGGTAGAGTCAAGCTTGGATGAGACGCATAACTCTCTAATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCGAGCAAAAATGTTTCTTCCAAAGAGATAGCTCGACTGAAGAAATTGATTGGATATTGGAAGGAGCAAGCAGGAAGGAGAGGAGAGGATGAAGATTTAGAAGAAATCCAAGAAGAAAGACCAACTAAAGAGAGGACTGATGGCCGGCATTCTATGTAA 3813 0.3902 MTIDVPPSGAQSVRTNRPSFSSSNGIEATPVHNYASVSNGDGYDSDGSNFAPLTPTTLSMAIPSELAGAVPLIDKFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSMLKLNGDLASRATKLFQIILKYIGVDLSDRVTPISLEEQVELVGKLYKQSLKRSELRDELFVQLSKQTRNSPESREYLIKAWELMYLCASSMPPSKDIGAYLSEYVHNVAYGVTADPEIRALALNTLNALKHSVKAGPRHIIPGPVEIEALLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKVVTGTKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKDRSKGDILHCKLIFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRARREWELDILSCYHSLAHVTKEDARQQFLHILRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGPLNEDISNDFKPSNLELYEKRVQELSKLVEESQRNADQLLDNLREKQKQEEEMLQELEGLKRSLTAGKQSLAEVTNDRDKLRSLCDEKDKALQAEILEKRSMEAKMAELSNLVTKNTTKKDCTQTNNQVSQKLEDDLKLCKGELRVTEETIKSLRSDKLILEQKLSELEKKSAEEINSLQWKLEQERKTLNSKVYDLERKLDVFRQELTVAESTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAVQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIASKERDSLTTTDEFTVEHPWKDDKPKQHIYDRVFDGDATQEDIFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGVENNPGLTPCATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVAVENVTIVSISTMEELNSIIQRGSEQRHTSGTQMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLIGYWKEQAGRRGEDEDLEEIQEERPTKERTDGRHSM* 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1324 1270 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Gso1g1324 1270 Gene3D - 283 387 - -
Gso1g1324 1270 ProSiteProfiles FERM domain profile. 284 598 IPR000299 GO:0005856
Gso1g1324 1270 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1266 - -
Gso1g1324 1270 ProSiteProfiles Kinesin motor domain profile. 894 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 ProSiteProfiles MyTH4 domain profile. 119 279 IPR000857 GO:0005856
Gso1g1324 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1243 IPR027417 -
Gso1g1324 1270 SMART MyTH4_1 119 279 IPR000857 GO:0005856
Gso1g1324 1270 Coils Coil 822 859 - -
Gso1g1324 1270 Coils Coil 794 814 - -
Gso1g1324 1270 MobiDBLite consensus disorder prediction 1 27 - -
Gso1g1324 1270 Gene3D - 396 497 IPR014352 -
Gso1g1324 1270 Gene3D MyTH4 domain 98 280 IPR038185 -
Gso1g1324 1270 MobiDBLite consensus disorder prediction 1242 1270 - -
Gso1g1324 1270 CDD FERM_C_KCBP 502 607 - -
Gso1g1324 1270 Gene3D - 502 607 IPR011993 -
Gso1g1324 1270 Gene3D Kinesin motor domain 881 1217 IPR036961 -
Gso1g1324 1270 SMART kinesin_4 892 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 CDD FERM_B-lobe 399 497 IPR019748 -
Gso1g1324 1270 SUPERFAMILY PH domain-like 504 592 - -
Gso1g1324 1270 PRINTS Kinesin heavy chain signature 966 987 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 PRINTS Kinesin heavy chain signature 1085 1102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 PRINTS Kinesin heavy chain signature 1116 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 PRINTS Kinesin heavy chain signature 1165 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 Coils Coil 622 670 - -
Gso1g1324 1270 Coils Coil 751 778 - -
Gso1g1324 1270 Coils Coil 699 719 - -
Gso1g1324 1270 Pfam MyTH4 domain 172 277 IPR000857 GO:0005856
Gso1g1324 1270 Pfam FERM central domain 390 504 IPR019748 -
Gso1g1324 1270 PANTHER KINESIN-RELATED 615 1266 IPR027640 GO:0003777|GO:0007018
Gso1g1324 1270 SUPERFAMILY Second domain of FERM 382 499 IPR035963 -
Gso1g1324 1270 CDD KISc_C_terminal 892 1217 - -
Gso1g1324 1270 ProSitePatterns Kinesin motor domain signature. 1115 1126 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso1g1324 1270 Pfam Kinesin motor domain 900 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1324 1270 Gene3D - 1218 1266 - -
Gso1g1324 1270 SMART B41_5 280 504 IPR019749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1324 Gso-Chr1 49793257 49802633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1324 28 1265 Calmodulin-binding Proteins AT5G65930 72.284 0.0 1828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1324 - - gmx:100782701 2426.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1324 1 49793257 49802633 Gso11g0754 11 6798130 6807498 GST