Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1317 ATGGTCTTTGCCAAAATCGCATCACTCGTCGCCCCCAATTCACATTCCCTCCCCCACCCCCTTTCTCTCCAGGATCTCTCCTCGTACCACCGCCACCTCGAACCACCCCTCCAAGGCGGAACAACCTCGTCCTCACGCAACAAATGCCTCAGACTCTCACTCTACCTCGCCACCTTCCTGTTCCTAACTTACCTCCTCTTCCTCCTCCTCTACTCCTACTGGGCCCACGCTTCCTCCGCCAAGTACTACGTTGTCCTCGACTGCGGCAGCACCGGCACCCGCGTCTACGTCTACCGCGCCTCCGTCCGCTTCAACCGCCACACCACTCTCCCAATCGCCATCACCTCCCTGAGAAACCCCTCCCACAAGAAGCCTCCCACCGGCCGCGCCTACGATCGAATCGAAACCGAACCCGGTATCGATAAATTAGTAAACAACGTGTCTGGTTTGAACAATGCACTGAAACCTTTGCTCAGGTGGGCCAAGAAGCAGATACCAGTGAGTGCTCACAAGTCTACATTTTTGTTCCTTTATGCCACTGCTGGTGTTAGGAGGCTTCCTGTTAGTGATTCTCGGTGGCTGCTTGATAATGCTTGGTCTGTGCTTAAAGACTCTCCCTTTGTGTGCCAAAGGGATTGGGTTAAGACTATTTTGGGTCCCGAAGAGGCTTATTTTGGGTGGATAGCTCTTAATTATGATAGTGGCATTTTGGGGGTTAGGCCTAGGAAGGCTACTTATGGTGCTCTTGACTTGGGTGGCTCTTCCTTGCAGGTCACGTTTGAGAGTGATCAGCAGCTGAATAGTGAGACTAGTTTGTATGTTAGGATTGGATCTGTGAGCCATCATCTCACCGCGTATTCGCTGCCGGGGTATGGACTCAACGAGGCATTTGGTAAGTCTGTGGTGTATTTGTTTAGGAAGGAGTTTGGATTGGGTGATGTGGATGTGGGTAGTGGTGGGAATATTGAGTTGAAACATCCTTGCTTGCAGGAGGGGTATAGGGAGGAATACTTGTGTTCTCGTTGTTTGTCTAGTAAGAAAGGTGGGAATGGAGGGTTTGGAGGAACTCCATTAGTGCTTGTTGGTGCTCCCAATTGGGGGGAGTGCAGCACGCTTGCAAAAGTTGCTGTGAATTTGTCTGAGTGGTCTGATCATGGTGCTGGGCTTGATTGTGGAGCGCAGCCTTGTGCTTTGGGTGATAATCTGCCTCGCCCATATGGACACTTTTATGTGATTTCTGGATTTTATGTGGTGTATAGGTTTTTCAACTTGACTTCTGAGGCCACGCTTGACGATGTGTTGGTGAGGGGTAAGGGTTTTTGTGGAAAGAGGTGGGATGTTGCAAAGAGAAGTGTTGCTCCGCAGCCCTTTATTGAGCAGTACTGCTTCAGGGCACCCTACATTGCCTCTTTGCTGAGGGAGGGTTTGCACATTAATGATAACCAGATAACTGTTGGCTCTGGAAATATCACTTGGACACTTGGGGTTGCCTTGTTGGAAGCTGGAAAGGCGTTTTCCACTAGATTTGGGCTTCGTGACTTGGAGCTTTTTCAGATGAAGATAAATCCTCTTGTTCTTGTGCCCCTTTTGTTGCTTTCTTTTATTCTTCTTCTTTGTGCTTTATCATGTATTGGCAATTGGATGCCAAGGTTTTTCCGGAGGCAATATCTTCCCATTTCCAGGCATAACAGTGTTTCTGGTGCTTCTGTTCTCAACATACCATCTCCTTTTCGGTTCCAGCGATGGAGTCCAATGAACTCTGGGGATGGAAGACTTAAGATGCCTCTGAGCCCAAAAATTGCAAGTTCACAACAAAGCCCGTTTGGTCTAGGGCATGGTCTTGACAACAACAGTGGTGGCGTCGAGCTTATGAAGTCTTCATTGTACCCATCAGCTAGTAATGTCTCACATAGTTATTCCTCAAACAGTTTAGGGCAGATGCAGTTTGACAGTGGCAACATGGGTGCCTTCTGGTCCCCACACAGAAGTCAGATGCGTCTGCAGAGTAGGAGATCACAGTCTCGAGAAGACCTGAATTCCTCATTGGCTGAAGTTCATCTGGTGAAGCCGTGA 2073 0.4911 MVFAKIASLVAPNSHSLPHPLSLQDLSSYHRHLEPPLQGGTTSSSRNKCLRLSLYLATFLFLTYLLFLLLYSYWAHASSAKYYVVLDCGSTGTRVYVYRASVRFNRHTTLPIAITSLRNPSHKKPPTGRAYDRIETEPGIDKLVNNVSGLNNALKPLLRWAKKQIPVSAHKSTFLFLYATAGVRRLPVSDSRWLLDNAWSVLKDSPFVCQRDWVKTILGPEEAYFGWIALNYDSGILGVRPRKATYGALDLGGSSLQVTFESDQQLNSETSLYVRIGSVSHHLTAYSLPGYGLNEAFGKSVVYLFRKEFGLGDVDVGSGGNIELKHPCLQEGYREEYLCSRCLSSKKGGNGGFGGTPLVLVGAPNWGECSTLAKVAVNLSEWSDHGAGLDCGAQPCALGDNLPRPYGHFYVISGFYVVYRFFNLTSEATLDDVLVRGKGFCGKRWDVAKRSVAPQPFIEQYCFRAPYIASLLREGLHINDNQITVGSGNITWTLGVALLEAGKAFSTRFGLRDLELFQMKINPLVLVPLLLLSFILLLCALSCIGNWMPRFFRRQYLPISRHNSVSGASVLNIPSPFRFQRWSPMNSGDGRLKMPLSPKIASSQQSPFGLGHGLDNNSGGVELMKSSLYPSASNVSHSYSSNSLGQMQFDSGNMGAFWSPHRSQMRLQSRRSQSREDLNSSLAEVHLVKP* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1317 690 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 41 662 IPR000407 GO:0016787
Gso1g1317 690 Pfam GDA1/CD39 (nucleoside phosphatase) family 78 499 IPR000407 GO:0016787
Gso1g1317 690 Gene3D Exopolyphosphatase. Domain 2 219 487 - -
Gso1g1317 690 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 41 662 - -
Gso1g1317 690 Gene3D - 72 218 - -
Gso1g1317 690 MobiDBLite consensus disorder prediction 661 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1317 Gso-Chr1 49731104 49734868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1317 17 689 Nodulin-like Gene Family AT4G19180 57.347 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1317 - - gmx:100780726 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1317 1 49731104 49734868 Gso11g0757 11 6825305 6828919 GST
Gso1g1317 1 49731104 49734868 Gso16g0621 16 7892579 7900114 PCT
Gso16g0621 16 7892579 7900114 Gso1g1317 1 49731104 49734868 PCT