Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1307 ATGGAACTAAGCACCATGTTTTGCTTGTGTGCTTCGTTTCTCTTCATTGTTCTCTTCAGGGCACTCATCAAACCTTATTATGTCTCCAAACGCCGTGACTTGCCACTCCCACCTGGCTCCATGGGTTGGCCTTACATAGGAGAAACCTTTCAAATGTATTCTCAAGATCCAAATGTCTTCTTTGCCTCAAAAATAAAAAGGTTTGGCTCTATGTTCAAGTCCCACATTCTAGGTTGTCCCTGCGTGATGATTTCCAGCCCCGAGGCTGCAAAGTTTGTGCTCAACAAAGCTCAACTCTTCAAGCCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTTGTTCTTCGCACCTTCATGCCCGAAGCCATAAAAAACATCATACCTGACATTGAATCCATTGCCCAAGATTGCTTAAAGTCTTGGGAAGGCCGTCTGATCACCACTTTCCTTGAAATGAAAACGTTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGGAAAGAAGAGATTCTGTACAGAGATGCTCTGAAACGGTGCTACTACACTCTGGAGCAAGGGTACAACTCAATGCCCATAAACGTTCCAGGGACACTGTTCCACAAGGCGATGAAGGCAAGGAAGGAACTTGCACAAATCGTGGCCCAAATAATCTCGAGCAGAAGGCAGAGGAAGCAGGATTTTCACAAGGACCTTTTGGGTTCATTCATGGATGAGAAATCAGGGCTCACCGATGAGCAGATAGCGGATAATGTAATTGGCGTCATATTCGCAGCTCGTGACACCACCGCCAGTGTGCTGACGTGGATCGTCAAGTACCTTGGTGAAAATCCCAGTGTCCTAGAAGCTGTTACTGAGGAACAAGAGTGCATATTGAAGAGCAAGGAAGAAAGTGGAGAAGATAAGGGTCTAAATTGGGAAGATGCAAAAAAGATGCCAATAACTTCAAGGGTCATTCAGGAGACTCTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGGATGTTGAATACCAAGGGTATCTTATTCCAAAAGGGTGGAAAGTGCTACCTCTATTTAGGAACATACACCACAGTCCAGACAACTTCAAGGAGCCAGAAAAATTTGATCCCTCAAGATTTGAGGCTGCTCCAAAGCCCAACACTTTTATGCCATTTGGCAGTGGGATCCACATGTGTCCAGGGAATGAATTAGCCAAGTTGGAGATTTTGGTCCTCCTACATCATCTGACCACAAAGTACAGGTGGTCTGTTGTGGGTGCAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAACGGCTTACCCATCACATTATTTCCCAAGAGCAAGTAG 1404 0.448 MELSTMFCLCASFLFIVLFRALIKPYYVSKRRDLPLPPGSMGWPYIGETFQMYSQDPNVFFASKIKRFGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIIPDIESIAQDCLKSWEGRLITTFLEMKTFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQIVAQIISSRRQRKQDFHKDLLGSFMDEKSGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKSKEESGEDKGLNWEDAKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNTFMPFGSGIHMCPGNELAKLEILVLLHHLTTKYRWSVVGAKNGIQYGPFALPQNGLPITLFPKSK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1307 467 Pfam Cytochrome P450 37 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PANTHER CYTOCHROME P450 26 11 463 - -
Gso1g1307 467 Gene3D Cytochrome P450 27 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 SUPERFAMILY Cytochrome P450 27 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 463 - -
Gso1g1307 467 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Gso1g1307 467 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1307 467 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1307 Gso-Chr1 49571337 49574219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1307 1 467 Cytochrome P450 AT4G19230 70.675 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1307 K09843 - gmx:100170674 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1307 1 49571337 49574219 Gso1g1307 1 49571337 49574219 ECH
Gso1g1307 1 49571337 49574219 Gso9g1805 9 42539504 42542417 GST
Gso1g1307 1 49571337 49574219 Gso16g0613 16 7752506 7755856 PCT
Gso16g0613 16 7752506 7755856 Gso1g1307 1 49571337 49574219 PCT