Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1290 ATGGCGGGGCAATCGCGGAAGTGGATGATTCTGGTGGCCACCATATGGATTCAGGCATTCACCGGCACCAATTTCGACTTCTCCGAGTACTCATCTTCCTTGAAGTCCCACCTCAACATCTCTCAGCTGCAACTCAACTACCTCGCCACCGCCAGCGACATGGGCAAGGTCTTCGGCTGGTCCTCCGGCCTAGCTCTCATGTACTTACCTCTCTCCCTCGTCTTGTTCATCGCCTCCTCCATTGGATTCATCGCCTACGGCCTCCAGTGGCTTGCCATCAAAAATCTCATCACCTTGCCTTATTATCTGTTCTTTCTTCTGTGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGTTAACAGACCCCTTGCATTATCACTCACTGTGAGTTTCAATGGTGTGAGTGCAGCACTCTACACACTTGCTGCGAATTCAATAGACCCTTCATCTGATGCATTGTACCTGCTCTTGAATGCCCTTGTTCCCCTTCTCACTTCCCTTGCAGCACTAGTCCCAATTCTTCTCCAACCCCCTTTAGACTCTCTCAATAGATCTCCAGAAGCTTCTCGCAGGAACTCAGTGATATTTCTAGTACTCAACTTCCTAGCCATTTTCACTGGCATTTACCTCCTTCTCTTTGGCTCATCAACTTCTGATGAATCCACGTCGAGGCTCTACTTTGGTGGTGCCATTTTGTTCCTCATATCCCCACTATGCATCCCTGGCACTATATATGCTCGAGATTGGTTTCACCATGCCATCCATTCCAGCTTTCGGATGGAAGGCTCCGGCTTCATTCTTGTCCATGTCGATGATCTTGAGCTGCATAAGGAACTCCTCACGCGTCAAAACAGCACTCTCAGTCTCAGCAATGGGGACGGTCATGGCCTGCTGAGTGAGAATGGATCCAAGTATAGAAGTCAGAGTGCAAAATCTAGTGATGTGTGTTGTGGCAAGATGTTTGGCCAGGATCAGTTGGCAATGCTAGGTGAAGAGCACACTGCTGCAGTGGTTGTCCAGAGGTTGGATTTCTGGCTCTATTATGTTACATACTTCTGTGGAGGCACAATAGGACTTGTTTACAGCAATAATCTGGGACAGATAGCTCAATCTTTAGGCCTCAGTTCAAGTATATCTACCCTTGTCACACTCTACTCGGCATTTTCCTTCTTTGGCCGCTTGCTTTCAGCTGTACCAGACTATATTAGAAACAAGTTCTACTTTGCAAGGACCGGATGGCTAGCCATTGGACTTGTTCCAACCCCAGTTGCATTCATACTGCTTGCTGTATCAGACAGTGCCGCGGCACTTAAAACAGGCACTGCACTGATTGGTTTGAGTTCTGGCTTCATATTCGCGGCTGCTGTGGCAGTTACATCGGAGCTATTTGGACCCAACAGTGTGAGCGTCAATCACAACATTCTCATAACAAATATCCCCATTGGGTCGCTTCTGTTTGGTTTTCTGGCTGCGTTGATTTATGATGAGAATGCTTACAAAATCCCGGGAGAGTTAATGGCTGACACACTGGTGTGCATGGGAAGAAAGTGCTACTTCTGGACATTTGTCTGGTGGGGAGGAATGTCTGTCCTAGGACTATGTTCAAGTGTGTTGTTGTTCTTGAGAACCAAACACGCGTATGATCGTTTTGAGAGACACCGGATTTCAGCTCAATTGATTGTGTCTTAG 1728 0.4734 MAGQSRKWMILVATIWIQAFTGTNFDFSEYSSSLKSHLNISQLQLNYLATASDMGKVFGWSSGLALMYLPLSLVLFIASSIGFIAYGLQWLAIKNLITLPYYLFFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDALYLLLNALVPLLTSLAALVPILLQPPLDSLNRSPEASRRNSVIFLVLNFLAIFTGIYLLLFGSSTSDESTSRLYFGGAILFLISPLCIPGTIYARDWFHHAIHSSFRMEGSGFILVHVDDLELHKELLTRQNSTLSLSNGDGHGLLSENGSKYRSQSAKSSDVCCGKMFGQDQLAMLGEEHTAAVVVQRLDFWLYYVTYFCGGTIGLVYSNNLGQIAQSLGLSSSISTLVTLYSAFSFFGRLLSAVPDYIRNKFYFARTGWLAIGLVPTPVAFILLAVSDSAAALKTGTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLFGFLAALIYDENAYKIPGELMADTLVCMGRKCYFWTFVWWGGMSVLGLCSSVLLFLRTKHAYDRFERHRISAQLIVS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1290 575 Pfam Nodulin-like 7 254 IPR010658 -
Gso1g1290 575 Gene3D MFS general substrate transporter like domains 352 564 IPR036259 -
Gso1g1290 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 575 - -
Gso1g1290 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 575 - -
Gso1g1290 575 SUPERFAMILY MFS general substrate transporter 6 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1290 Gso-Chr1 49330468 49335694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1290 1 569 Nodulin-like Gene Family AT1G31470 57.193 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1290 - - gmx:100814771 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1290 1 49330468 49335694 Gso1g1290 1 49330468 49335694 ECH
Gso1g1290 1 49330468 49335694 Gso9g1787 9 42327557 42332306 GST
Gso1g1290 1 49330468 49335694 Gso16g0605 16 7589514 7595044 PCT
Gso16g0605 16 7589514 7595044 Gso1g1290 1 49330468 49335694 PCT