Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1284 ATGGGCATTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTATGTTCTGCTGATACATGTTGTAATCAATAAAAGCGAAGCAATCACCCCCGATGGTGAGGTGCTGCTCAGCTTTAGGACATCAGTTGTTAGTTCTGATGGTATCCTATTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCTGAAAACCAAAAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGTGGGTCTATATCACCTGACCTTGGGAAGCTAGAGAATCTGAGGGTTCTTGCTCTTCATAACAACAACTTCTATGGGTCAATTCCACCAGAGTTGGGAAATTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAGCGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTCAGTGGGAATATTCCTGCATCACTTGGGAAGTTGTATAATCTCAAAAATTTCAATGTATCAACCAATTTTCTGGTCGGACCTATACCTTCTGATGGTGTCCTTGCCAACTTTACTGGAAGCTCCTTTGTTGGGAATCGTGGTTTGTGTGGAGTGAAAATAAATTCAACATGTAGAGATGATGGTTTGCCGGATACCAATGGTCAATCTACTAACTCAGACCAAAATCAAATAGGAAAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCTCTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGCAAAAACGACAGAATAAGTCTGGCAATGGATGTTGGTGCAGGTGCATCAATTGTGATGTTTCATGGAGACTTACCATATTCTTCAAAAGACATCATCAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGGGGGTTTGGAACTGTTTACAAGCTAGCAATGGATGATGGGAATGTGTTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTACGAGGATATTGCAATTCACCCACGTCAAAGTTGTTAATATATGATTACCTACCAGGTGGTAGTCTTGACGAAGCACTTCATGAAAGAGCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCCAGGATCATACACCGAGACATAAAATCTAGCAACATTTTACTTGACGGAAACTTGGATGCTCGGGTCTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCTGGAACGTTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGTCTGATGTGTATAGCTTTGGTGTGTTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGACGCAGCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACAGAAAATAGGCCGAGGGAAATTGTTGACCCTCTATGTGAAGGGGTGCAAATGGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCAGTGCGTTTCCTCAAGTCCAGAGGATCGACCCACCATGCACCGAGTGGTGCAATTGCTTGAATCCGAGGTCGTAACTCCATGCCCTAGTGACTTCTATGACTCCAACTCCGATTAG 1788 0.4239 MGICLLKWQWPWLLYVLLIHVVINKSEAITPDGEVLLSFRTSVVSSDGILLQWRPEDPDPCKWKGVKCDLKTKRVTHLSLSHHKLSGSISPDLGKLENLRVLALHNNNFYGSIPPELGNCTELEGIFLQGNYLSGAIPSEIGNLSQLQNLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPSDGVLANFTGSSFVGNRGLCGVKINSTCRDDGLPDTNGQSTNSDQNQIGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERAEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPREIVDPLCEGVQMESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1284 595 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Gso1g1284 595 Gene3D Phosphorylase Kinase; domain 1 283 385 - -
Gso1g1284 595 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
Gso1g1284 595 SUPERFAMILY L domain-like 30 195 - -
Gso1g1284 595 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 595 IPR031071 GO:0004672|GO:0005524|GO:0030244
Gso1g1284 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Gso1g1284 595 Gene3D Transferase(Phosphotransferase) domain 1 386 583 - -
Gso1g1284 595 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1284 595 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1284 595 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1284 595 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Gso1g1284 595 SUPERFAMILY Protein kinase-like (PK-like) 295 577 IPR011009 -
Gso1g1284 595 PANTHER RECEPTOR-LIKE PROTEIN 55 3 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1284 Gso-Chr1 49288184 49297870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1284 1 586 Receptor kinase-like Gene Family AT2G35620 75.939 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gso1g1284 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1284 - - gmx:100819230 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1284 1 49288184 49297870 Gso1g1284 1 49288184 49297870 ECH
Gso1g1284 1 49288184 49297870 Gso9g1783 9 42294712 42303674 GST