Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1283 ATGTTCGGTGGCGGAGGGGAGGACGCGCTGGCGGCGCGGCTGGGCATGATGCCGCCGTCGCTGCTGAATCCAGCGTCGGTGATGTCCGGCGAGATGTCTCCGGCGGTTCCGGCGGCGAGGGAGGAGAGGGGGCCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGCGCGGAGCTGGAGAGAGACTTCACTGCGTCGAAGCGGAACAAGACGCTCTGGGAAGTGGTGAGTGCGAAGATGAGGGAGAGAGGGTTCAGGAGAAGCCCCGAACAGTGTAAATGCAAGTGGAAGAATCTCGTTAATCGCTACAAGGGAAAAGAGACATCTGACCCAGAGCATGGCAAGCAATGTCCATTTTTTGAAGAATTGCATGCGGTCTTTACCCAAAGGGCACATAATATGCAACGATTACTTCTTGAATCTGAAACTCGTTCAGCTCAAACCAAGAAAGGGGTGAAAAGATCAAGTGGAGATCGGTCATCAGAGGAACTCTCAGAAGATGACAATGAGGTTGAATATGATAGTGAAGAGGAAAAACCTTCCAGAAGTAATACCCGCAAAAGGAAAGTTGACAAAGTTGGAGTGGAGAAGTCTTCAAGGGCAAGCAATCCATCAAATTCTGCCAGTAATAGTACTAGTATTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGTTAAGTATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGTTGTTTGAACAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGGTTAATGATTGAACAGGCATGGAGGGAGAGGGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACGACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 927 0.5027 MFGGGGEDALAARLGMMPPSLLNPASVMSGEMSPAVPAAREERGPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDDNEVEYDSEEEKPSRSNTRKRKVDKVGVEKSSRASNPSNSASNSTSIQEMLKEFFQHQLSMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLINESN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1283 308 MobiDBLite consensus disorder prediction 145 218 - -
Gso1g1283 308 MobiDBLite consensus disorder prediction 181 202 - -
Gso1g1283 308 MobiDBLite consensus disorder prediction 29 53 - -
Gso1g1283 308 CDD GT1 48 113 - -
Gso1g1283 308 PANTHER - 46 306 - -
Gso1g1283 308 MobiDBLite consensus disorder prediction 152 168 - -
Gso1g1283 308 MobiDBLite consensus disorder prediction 204 218 - -
Gso1g1283 308 PANTHER - 46 306 - -
Gso1g1283 308 Coils Coil 253 273 - -
Gso1g1283 308 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Gso1g1283 308 SMART sant 46 108 IPR001005 -
Gso1g1283 308 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Gso1g1283 308 Gene3D - 50 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1283 Gso-Chr1 49273267 49275688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1283 35 303 Trihelix Transcription Factor Family AT2G38250 45.055 1.05e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso1g1283 Myb_DNA-bind_4 1.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1283 - - gmx:100812635 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1283 1 49273267 49275688 Gso1g1283 1 49273267 49275688 ECH