Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1269 ATGCTCATAGTCATGGCTGCTTCAAGCTCTCTTTTGAGGATGGAACAAATACCTGGCAAAGGAAGAGGTCTTGTTGCATCACAGCCTCTAAAAGCAGGTCAAATAGTCCTCACTGAATCCCCTCTCATTCTCTACTCAGCTTCTCCTCTCCTCACACCCTCTTCTTCACCTTACACTTACTGTGACCATTGTTTCAGAATCTTACCTCTCACTCACAATAGTACTACTGTCACGTGCCCTTCTTGCTCAAACCACAGTTTTTGTTCCCAGAAGTGCTTCTCCCTTGCACTCAAATCCTCACACTCCACTTGGGTATGCAAAGCACTCATGTCTCTTCAACAACACCCCAATTCAACACTTCTTCAACAACACCCCCAAGAACGCCAAGTCCAAGCCCGTTTAATTGTTGCTTCTCACAAGCTCTTCCTTCACAATCACACCCCTTCTGAGCTAGACACTTTTCTTTCTCTTCATGGCACCCCAGATGATGCTATTCTTGATGCTGCTAACTTTCTTCACTCGCTAATCTCACCACTTTTCCCACCTCAGGCTCAACTCTCTGTGGATCTCATTGCACAACTTCTTGCAAAGGACAGACTCAACTCCTTTGGCTTAATGGACCCTTATTCCCCTGATGGCCCTCAGAGATCTATTAAGGCTTATGCTATTTACCCCAAAGCCACGTTCTTCAACCATGACTGTGTTCCCAATGCATGCAGGTTTGACTATGTGGACAGTACTAATGATGATTATGAACACAACAGTACTGACATTGTTATTAGGTTGATTGAGGATGTTGATGAGGGGAAAGAGGTTTGCATCAGCTATTTCAGGATTGGTAGGGACTATTGTACAAGGAAAAGGATCTTGATGGAGGATTATGGGTTTACTTGTGGATGTGATAGGTGCAAGATTGAAGCTAATTGGGATGGTGAAGAAAACAACAGTGACCTTCCACACGTGCGGTTTCTTAGCAAGTATGTTTGTGAGAGGAAGAATTGTGCGGGAACTATGGCTCCTCTGCCTCCAAAAGATGATGTGCCATCTAATGTTCTGGAATGTAACTTCTGTGGTAATTTTAAGATTGATGCTGCTTAA 1098 0.4399 MLIVMAASSSLLRMEQIPGKGRGLVASQPLKAGQIVLTESPLILYSASPLLTPSSSPYTYCDHCFRILPLTHNSTTVTCPSCSNHSFCSQKCFSLALKSSHSTWVCKALMSLQQHPNSTLLQQHPQERQVQARLIVASHKLFLHNHTPSELDTFLSLHGTPDDAILDAANFLHSLISPLFPPQAQLSVDLIAQLLAKDRLNSFGLMDPYSPDGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDSTNDDYEHNSTDIVIRLIEDVDEGKEVCISYFRIGRDYCTRKRILMEDYGFTCGCDRCKIEANWDGEENNSDLPHVRFLSKYVCERKNCAGTMAPLPPKDDVPSNVLECNFCGNFKIDAA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1269 365 SUPERFAMILY SET domain 10 298 IPR046341 -
Gso1g1269 365 ProSiteProfiles SET domain profile. 10 277 IPR001214 GO:0005515
Gso1g1269 365 Gene3D - 123 202 - -
Gso1g1269 365 SMART set_7 10 283 IPR001214 GO:0005515
Gso1g1269 365 Gene3D - 60 122 - -
Gso1g1269 365 Gene3D SET domain 23 304 IPR046341 -
Gso1g1269 365 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 365 - -
Gso1g1269 365 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 365 IPR044238 -
Gso1g1269 365 CDD SET_SMYD 200 303 - -
Gso1g1269 365 Pfam SET domain 21 276 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1269 Gso-Chr1 49101179 49102631 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso1g1269 SET 7.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1269 - - gmx:100808530 752.281