Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1268 ATGAGCGTTCCTCCGCCGTATGCGGCGGCGATGTGGACGCCGTTCACGGCGGCACAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGTCTCTCGGTTCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAGTTGATGTCTCATCCATCTCTGGGGTTTTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGAACCGATGGGAAAAAGTGGAGGTGTTCGAGGGATGCGCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGGCGGCGTTACCGTTCAAGAAAGCCTGTGGAATCATCTCAAACTCACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTACTGCTGCTTCTTCAAATTCAAATCCTGTTGCTGGTGGTGGTGGTGGTTCTGTTGCTAATGTTTCTGGAACTGCAACTGCTGCAAAAACCCTTCACACCCTTCCCTTGCACACCAATGGTGCAAGGGAAGGTTTCACTTTCACCCTTGGGAACAACACCAACACCACCCTCCCACACCTTCACATGAACCCCCTCACTCTTTCAGCTGACAATACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGATGAGCACAACGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTTACCTCAGATGCCATGTGGTCTCAAATGTCTCACATTCCATCAAATACTGTTTCGGAATCAAGAAGTGGTTCTACTATGCTGGGCAACTGCTTCCAACATCAAACAATGCGAGATGCTGAGCTGTTGAACCTGGAAACGGCAAGGACCAAAGATCTTGTCTTTAGTGGCCAGTTAAGTTCAGCTGGGGGTTTGAAACAGGAATATCAGTCTCCCCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCCCTTGAGTATAAGCCTAACAAGGATTTTAACTGCAACCCAGATGCCAATGTTTGA 1008 0.496 MSVPPPYAAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGFYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSQTHSSSSSSSSSSATAASSNSNPVAGGGGGSVANVSGTATAAKTLHTLPLHTNGAREGFTFTLGNNTNTTLPHLHMNPLTLSADNTKKTYRFGLNSEADEHNVLQKDLGSVRYQGYDFTSDAMWSQMSHIPSNTVSESRSGSTMLGNCFQHQTMRDAELLNLETARTKDLVFSGQLSSAGGLKQEYQSPQSLFSDWDWKKDLSSSALEYKPNKDFNCNPDANV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1268 335 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso1g1268 335 MobiDBLite consensus disorder prediction 110 143 - -
Gso1g1268 335 PANTHER GROWTH-REGULATING FACTOR 1 335 - -
Gso1g1268 335 Pfam WRC 68 110 IPR014977 -
Gso1g1268 335 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso1g1268 335 MobiDBLite consensus disorder prediction 67 97 - -
Gso1g1268 335 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso1g1268 335 MobiDBLite consensus disorder prediction 66 143 - -
Gso1g1268 335 PANTHER - 1 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso1g1268 335 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1268 Gso-Chr1 49093628 49097567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1268 14 113 GRF Transcription Factor Family AT3G13960 58.036 1.37e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso1g1268 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1268 - - gmx:100809947 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1268 1 49093628 49097567 Gso9g1755 9 42014159 42018022 GST