Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1233 ATGGAAGCTAAGCCTCTTCGAACTGTTCCCTCTTCACACAACACTTCTGGGGTAGGAGGTGGACCCCAGAAGAAGATTGACATGGGACACAAGATGGTAGGTGATGTTGGTGTTGTTGTTGTTGATGAAAGAAAGAGGGTTGTTGTGGTCAAGGAAGAGAAAGAGAACACTTCTTCCTACAGTGTTGAACTTCATCTCGGGGTTGATGCTTCTCATTCTGCTCCACAAGAAATAAACCATGTGATCACGGAAGCTCAGAGGCGTGAGCTTCACCATCAAGTTTTCATCTTCAACCATTTGGCATATAATCTTCCTCCTCCTTATCACCTTGTGCAATTCCCGAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAGCCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGTGGTAAGAATGTGGTGCCTAACCAGAAGTACTGTGAAAGACACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAATTAACTCTCATCTGGCAACAAAGCCATCTAGCAAGTCACACAACAAACCCGCCTCAAGGACACAATTTGAAATTTCAAATCCAAACCTTATGGCCATTCGACATAGTGACACATCAAGTACCCCATCAAGGAGTCTCAGTGTTGCCAATTGCTCTTCTGCTAATAATAGGTGGAAAAATAGTGCAAGTTATGCTGACTACCTCACATCGTTTTCTTCTGCGTCTGCAGTGTCCCCTGGATCCACTCTTGCCACTCCAGTTGCTCCTAAGATGGCCACCTTCAGCAGTGTGACATCCATTGCTTCAGATAGAGGAAGTTGCCTAAATATATGCCAGAAAGATAACAAGTCCAAGAGCTGTATCAGCAACAACATCAGTGTTAAAAGTGGTGGGAAAGGAAGAATTGTTGGTGACACTAATGGCATTTCTACTGGAATAGGCTTCTCCCCAACGAGTGTTCTTCAAGTTTCTGGTTGCAACCCTTCATACCTGAATGACAGAACCAACATAGAATCTGCATCCGGTAGGTGCCGGAGAACAGATGGTAAGAAGTGGCAATGCAAGAGTGCTGTTCTTCCGGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGGCTCACAAGCCATGAACCGGCAGTTACCATTGCGCGGTTGCCTAACTCTTCAGTCACAACCAAAATGCAGAAAGCGCATTGTGCAATTCCAAACACAAATCTTTCCATGTCAGTCCCAGCAAGTGAACCATTCATACAATGTAATGAGAAAAGTCAAAGTACCAGTGACACTGATACCACCATCAGTGACACCTTGAATGAGTGTAGCTATGCTTCTTTCTGA 1383 0.4476 MEAKPLRTVPSSHNTSGVGGGPQKKIDMGHKMVGDVGVVVVDERKRVVVVKEEKENTSSYSVELHLGVDASHSAPQEINHVITEAQRRELHHQVFIFNHLAYNLPPPYHLVQFPSNMSEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPVETSQINSHLATKPSSKSHNKPASRTQFEISNPNLMAIRHSDTSSTPSRSLSVANCSSANNRWKNSASYADYLTSFSSASAVSPGSTLATPVAPKMATFSSVTSIASDRGSCLNICQKDNKSKSCISNNISVKSGGKGRIVGDTNGISTGIGFSPTSVLQVSGCNPSYLNDRTNIESASGRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSHEPAVTIARLPNSSVTTKMQKAHCAIPNTNLSMSVPASEPFIQCNEKSQSTSDTDTTISDTLNECSYASF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1233 460 ProSiteProfiles WRC domain profile. 132 176 IPR014977 -
Gso1g1233 460 Pfam WRC 352 391 IPR014977 -
Gso1g1233 460 Pfam WRC 133 175 IPR014977 -
Gso1g1233 460 MobiDBLite consensus disorder prediction 173 224 - -
Gso1g1233 460 ProSiteProfiles QLQ domain profile. 81 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso1g1233 460 MobiDBLite consensus disorder prediction 160 224 - -
Gso1g1233 460 PANTHER GROWTH-REGULATING FACTOR 9 339 432 - -
Gso1g1233 460 PANTHER GROWTH-REGULATING FACTOR 9 51 272 - -
Gso1g1233 460 MobiDBLite consensus disorder prediction 1 26 - -
Gso1g1233 460 ProSiteProfiles WRC domain profile. 349 393 IPR014977 -
Gso1g1233 460 PANTHER - 51 272 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso1g1233 460 PANTHER - 339 432 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1233 Gso-Chr1 48463465 48467112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1233 85 387 GRF Transcription Factor Family AT2G45480 33.535 1.50e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1233 - - gmx:100795050 854.358