Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1228 ATGGCTTACCGAAACGGCGTCGCTCTGGCTCAGAGGGGAAGTGCCGTTAAGTTCGAACGCCCAAACCACCTCAGAACGCCGTCGTCGCCTAAGCCCCGCTTCCCTCACTCGCCGGGATCCGCCGTCCGCCGCTCCACCTCCGCCGCAGCTAGAAGCGGAGACGGAGTGCCTGGAAGAGTTCGAGTGTCTGTAAGGTTGAGACCTCAAAATACTGAAGAAATGATGGCTGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCAGAGCTTAAAAGACTGAAACTTCGGAAAAACAATTGGGATTCAGATACCTATGAGTTTGATGAAGTGCTTACTGAATTTGCATCACAAAAGCGTGTTTATGAAGTTGTAGCTAAGCCAGTAGTTGAGAGCGTTCTTGATGGTTATAATGGAACTGTGATGGCTTATGGTCAAACTGGAACGGGCAAAACTTTTACTCTTGGACAATTGGGGGAGGAAGATACCTCTGATCGTGGTATCATGGTTCGTTCTATGGAGGATATCTTAGCTGACATATCTCCAGGAACTGATTCTGTCACCGTCTCATATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAATGATAATATTCCTATCGTGGAAGATCCAAAAACTGGTGATGTGTCTTTGTCTGGAGCTACTCTAGTGGAAATCAAGGATCAGCCAAGTTTCTTGGAGTTGCTAAGAGTAGGGGAAACTCATCGAATTGCTGCCAACACAAAGTTGAATACCGAATCTTCTCGTAGTCACGCTATACTGACGGTACACGTTAAGAGGTCTGTTGTGGACAGTGAAGATGTTGTTTCTACTGAAAATAATGATGCCTCTCACTTGACTAAACCTTCAAAACCACTTGTTCGAAAGAGCAAGTTGGTTGTGGTAGATTTGGCAGGATCAGAGCGTATCCATAAGTCAGGAAGTGAAGGGTACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTAAGTGCACTGGGAAAATGTATTAATGCTCTAGCAGAAAACAATTCTCATGTTCCATTTCGTGATTCAAAACTTACTAGATTGCTCAGAGATTCATTTGGAGGAACAGCAAGGACTTCATTGATTGTTACTATTGGCCCATCTCCACGTTATCGAGGAGAGACTTCTAGTACCATATTGTTTGGGCAAAGGGCTATGAAGGTTGAGAACATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTTTGTCTCGGAGGCTTGAGGTACAATTAGATAACCTTATTGCAGAAAATGAAAGGCAGCAAAAGACTTTTGAAGAAGAAGTCGGAAGATTAAATTTGGAGGCACAATGTCGTATATCTGAGGTTGAGAGGAAATTTGCTGATGCATTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAATCAGTTAAGCAGCTAGAGCAGAAGTTGGTGTCAAATGAGAAAAGACATGGCAGCAATTATTTTGTGGATGGTTGTGGAGAGGGCCCAACTCCATCTTCTGAAGATGAAGTTTCTGAGATCAGAAAGCTGTTTGAAAATGAATGCAATAGGAGAAAGGCAGCGGAAGCAGAGGTAGAACATCTAAAAATTCTACTGGGGAAAAATACACACACACAGGCTGGAGGGGATGCAGAGGTTATAAAGGTTCACAGCATTCTGGAGGATGAGGTTAATCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAATTGAACTTTGAAGCTGAGCAGATGAAAAGATGTTTAGGAAGTGAAAGATCAGTAAATGCCTCCTCTGCCATGGATTCTTCCATGTCTCAAGTTAGGCATTCCCAACTCAAAGACACTGGGAATGGCCAGAAGGCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCGTTGCTGGACTCTGATGATCCCCTTGTACAGATTCATGCTGTTAAAATGGTGGCCAATCTTGCAGCGGAAGAGGTGAATCAAAAAGGTATTGTTGAAGCTGGTGGCCTTTCTTCCTTGTTGATGCTTCTTAGAAGATATGAGGATGAAACGGTTCGCAGAGTAGCAGCAGGGGCAATTGCCAATCTTGCCATGCATGAAGCCAATCAAGAACTTATAATGGCCGAAGGGGGAATCACTCTGTTGTCAATGACTGCATCTGATGCTGAAGAACCACAAACTCTTCGAATGGTTGCTGGTGCCATAGCTAACCTATGTGGAAATGATAAAATATTGATGAAGTTGAGATCCCAAGGAGGTATCAAGGCTTTACTGGGAGTTGTAAGATGTGGACATCCTGATGTTCTTTCACAAGTTGCACGAGGAATTGCCAACTTTGCCAAATGCGAGTCTCGAGCTTCTAGTCAAGGGATAAAAAGTGGTACGTCGTTTTTGATAGAAGACGGTGCACTTCCATGGATAGTACATAATGCTAACAATGAAGCTGCACCAATCAGGCGTCACATTGAACTTGCACTCTGCCACATGGCTCAACAAGAAGTGAATGCAAAAGACATGATCAATGGAGGTGCCCTTTGGGAGCTTGTCCGGATTTCAAGGGATTGTACACGAGAGGACATAAGGAATCTTGCTCGTCGGACTCTCACTTCTATCCTGCCATTCAAATCTGAATTGCGGCGATTACGTATAGACGTATAG 2697 0.4327 MAYRNGVALAQRGSAVKFERPNHLRTPSSPKPRFPHSPGSAVRRSTSAAARSGDGVPGRVRVSVRLRPQNTEEMMADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEEDTSDRGIMVRSMEDILADISPGTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPKTGDVSLSGATLVEIKDQPSFLELLRVGETHRIAANTKLNTESSRSHAILTVHVKRSVVDSEDVVSTENNDASHLTKPSKPLVRKSKLVVVDLAGSERIHKSGSEGYMLEEAKSINLSLSALGKCINALAENNSHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRYRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRRLEVQLDNLIAENERQQKTFEEEVGRLNLEAQCRISEVERKFADALEKERLKCQMEYMESVKQLEQKLVSNEKRHGSNYFVDGCGEGPTPSSEDEVSEIRKLFENECNRRKAAEAEVEHLKILLGKNTHTQAGGDAEVIKVHSILEDEVNQKKKLEEEIIILRSQLLQLNFEAEQMKRCLGSERSVNASSAMDSSMSQVRHSQLKDTGNGQKASVATLFEQVGLQKILSLLDSDDPLVQIHAVKMVANLAAEEVNQKGIVEAGGLSSLLMLLRRYEDETVRRVAAGAIANLAMHEANQELIMAEGGITLLSMTASDAEEPQTLRMVAGAIANLCGNDKILMKLRSQGGIKALLGVVRCGHPDVLSQVARGIANFAKCESRASSQGIKSGTSFLIEDGALPWIVHNANNEAAPIRRHIELALCHMAQQEVNAKDMINGGALWELVRISRDCTREDIRNLARRTLTSILPFKSELRRLRIDV* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1228 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 681 724 IPR000225 GO:0005515
Gso1g1228 898 Gene3D Kinesin motor domain 54 431 IPR036961 -
Gso1g1228 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 438 IPR027417 -
Gso1g1228 898 Coils Coil 563 590 - -
Gso1g1228 898 Coils Coil 417 466 - -
Gso1g1228 898 Pfam Armadillo/beta-catenin-like repeat 677 710 IPR000225 GO:0005515
Gso1g1228 898 ProSiteProfiles Kinesin motor domain profile. 59 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 PANTHER KINESIN-RELATED 42 889 IPR027640 GO:0003777|GO:0007018
Gso1g1228 898 PANTHER KINESIN-LIKE PROTEIN KIN-UB 42 889 - -
Gso1g1228 898 SUPERFAMILY ARM repeat 632 892 IPR016024 -
Gso1g1228 898 ProSitePatterns Kinesin motor domain signature. 301 312 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso1g1228 898 SMART arm_5 712 753 IPR000225 GO:0005515
Gso1g1228 898 SMART arm_5 630 669 IPR000225 GO:0005515
Gso1g1228 898 SMART arm_5 670 711 IPR000225 GO:0005515
Gso1g1228 898 SMART arm_5 754 794 IPR000225 GO:0005515
Gso1g1228 898 SMART arm_5 844 886 IPR000225 GO:0005515
Gso1g1228 898 SMART kinesin_4 57 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 Gene3D - 604 801 IPR011989 -
Gso1g1228 898 MobiDBLite consensus disorder prediction 19 56 - -
Gso1g1228 898 PRINTS Kinesin heavy chain signature 135 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 PRINTS Kinesin heavy chain signature 302 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 PRINTS Kinesin heavy chain signature 351 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 682 IPR000225 GO:0005515
Gso1g1228 898 CDD KISc 59 399 - -
Gso1g1228 898 Pfam Kinesin motor domain 65 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g1228 898 Gene3D - 802 890 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1228 Gso-Chr1 48377092 48393097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1228 54 403 Calmodulin-binding Proteins AT5G65930 34.877 3.25e-45 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1228 - K10396 gmx:100793472 1719.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1228 1 48377092 48393097 Gso1g1228 1 48377092 48393097 ECH