Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1224 ATGAGCATAAACTCTAGTTGTAGCATAAGTGGTGGGAGTAGTAGCGGTGGAAACAATAATAGTAGTGGTGGTAGCCCTTGTGGGGCGTGCAAGTTTTTGAGGCGAAAGTGCATGCCCGGTTGCATCTTTGCTCCGTACTTTGATTCGGAGGAAGGTGCCACGCACTTTGCCGCGGTGCATAAGGTTTTTGGTGCTAGTAACATTTCCAAGTTACTGCTTAACATTCCGGTGCATAAGAGGCTTGATGCGGTGGTCACAATTTGCTATGAAGCTCAAGCGAGGCTTAGAGACCCCGTGTATGGTTGTGTTGCTCATATCTTCGCTCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCTTCTTCACCACAAGCAACCACCATGGCACCTCCTCCATTGATCTCAATAGCTGAGTTCATCCCATCATCAGCCTTAGCCTCTTCAACCGTGCCACCCACATATGACCTCTCTTCACTTTTTGATCCAATGGCCCAGACTCCTTCGTGGGCTGTGCAGCCTAGGCCCATAGAGTCACGTCAATATGTGGGTAGCGGGCCTAGTGGCCCATCGGCCACTATTGCTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCAGTTGTTGCATGCTCTAATCCCTCTTCATCTTACCCGATTTCCAAATGA 744 0.496 MSINSSCSISGGSSSGGNNNSSGGSPCGACKFLRRKCMPGCIFAPYFDSEEGATHFAAVHKVFGASNISKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVMSLQAELSYLQGHLATLELPQPPPPSSPQATTMAPPPLISIAEFIPSSALASSTVPPTYDLSSLFDPMAQTPSWAVQPRPIESRQYVGSGPSGPSATIASGGDLQALARELLHRHGSAPVVACSNPSSSYPISK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1224 247 MobiDBLite consensus disorder prediction 1 24 - -
Gso1g1224 247 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 230 - -
Gso1g1224 247 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 230 - -
Gso1g1224 247 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Gso1g1224 247 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1224 Gso-Chr1 48289590 48294711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1224 29 232 AS2 family AT2G45420 60.766 2.89e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso1g1224 LOB 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1224 K21994 - gmx:100798425 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1224 1 48289590 48294711 Gso3g0184 3 2431209 2436247 GST
Gso9g2215 9 46490175 46494263 Gso1g1224 1 48289590 48294711 PCT
Gso1g1224 1 48289590 48294711 Gso9g2215 9 46490175 46494263 PCT